| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1760 |
|---|
| Symbol | |
|---|
| ID | 6409417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1890772 |
|---|
| End bp | 1893102 |
|---|
| Gene Length | 2331 bp |
|---|
| Protein Length | 776 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642711648 |
|---|
| Product | aldehyde oxidase and xanthine dehydrogenase molybdopterin binding |
|---|
| Protein accession | YP_001990763 |
|---|
| Protein GI | 192290158 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
|---|
| TIGRFAM ID | [TIGR02416] carbon-monoxide dehydrogenase, large subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0305576 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATTC TCCCCGGCTC CATGCGGTTC GGCGCGGGTC AGCCCGTCAA GCGTCTCGAG
GATCAGCGGC TGCTCACCGG GCACGGCGGC TACCTCGACG ACAAGGCCGC CGATGGCGCG
TTGTGGCTGG TGGTGATGCG CTCCCCGCAT GCGCATGCCG ACATCGTCTC GATCGATACC
GAGCCGGCGA AGGGGATGCC GGGCGTGGAA GCGGTGCTGA CCGGCGCCGA TCTCGTCGCC
GACGATGTCG GCACCATCCC GACCCTGCCG ATCTTCAAGC GGCCCGATGG CTCGCCGATG
GCGTTGCCGC TGCGCCGGTT GCTGGCGCAC GAGAAAGTCC GCTTCGTCGG CGAGCCGGTC
GCTGCCGTGG TCGCGACCTC GCAGCTCGCC GCGCAGGCGG CGATCGAGGC GATCGCGGTC
GAATACCACG AGCTGCCGGC GGTGACCGAT CCGACCGCGG CGATCCAGCC CGGCGCGCCG
GCGGTGTGGG CGGAGACGCC CGACAATATC GTGGCGGCGA TGAGCTATGG CGACGCCGCC
AAGGTCGATG CTGCGTTCGC CAGTGCCGCC CACACCGTGT CGCTCGATCT CGTCAGTCAG
CGCCTGATCC CCTCGGCAAT GGAGCCGCGC TCGACCATTG CCGAGATCGA GAAGAAGACC
GGCCGGCTGA TCCTGCACAC CCAGTCGCAG ACGCCGGGCC AGACCCGCGA CGCACTCGCC
GAGGCCATCC TGAAGCGGCC GAAGGAGAGC ATCCAGGTGC TGGTCGGTGA TATCGGTGGC
GGCTTTGGCC AGAAGACCGG CGTTTATCCC GAAGACGCGC TGGTCGCCTA CGCGGCGGTG
AAGCTGAACC GCAAGATCCG CTGGCGCGGC GAGCGCACCG ATGAGTTCAT CGGCGGCACC
CACGGCCGCG ACCTGACCTC GACCGCCTCG TTCGCGCTCG ACTCCAAGGG CAAGGTGCTG
GCCTATCGCG TCACCTCGAT CGGCGGCACC GGCGCTTACT TGGCGGGGGC CGGCGTGATC
ATTCCGCTGG TGCTCGGCCC GTTCGTGCAG ACCGGTGTGT ATCACCTGCC GGTGGTGCAT
TTCGACATCA AGGCGGTGAT GACTCACACC GCGCCGGTCG GCGCCTATCG CGGTGCCGGG
CGGCCCGAGG CGGTGTACAT CGTCGAGCGG CTGATGGACG CTGCGGCGCG CAAGCTGAAC
ATGGATCCGC GCGCGATCCG CAAGATCAAC TACATCAAGC CGTCGCAGCT GCCCTACACC
AACGCGGTCG GGCAGGTGTA CGACAGCGGT GCGTTTGCTC ACATGATGGA CCGGGCCGCG
GAGCTGTCCG ACTGGGACGG CTTCAAGGCG CGCAAGAAGG CGGCGCAGAA GAAGGGCCTG
CTCTACGGCC GCGGCGTCAC CAGCTACATC GAGTGGACCG GCGGCCGCGC CCACACCGAG
AACGTCAAGC TGCACGCCAC CGGAGAAGGC CGCGTCGTGC TGCATTCCGG CACCCAGGCG
ATGGGGCAGG GGCTGGAGAC CACCTACACC CAGATGATCG CTGCCGCGCT CGAGATTCCG
CTCGACAAGA TCGACGTCGT GCAGGGCAAC ACCGATTTGG CGATCGGCTT CGGCAGCGTT
GGCTCGCGCT CGCTGTTCGT CGGCGGCACG GCGGTCGCGG TCTCATCGGC CGAGATGATC
GCCAAGGCCC GCGAGAAGGC CGCCAACATC CTCGAAGCGT CGATCGAGGA CATCGAATAC
TCCGGTGGCA TGCTGACCAT CGCCGGCACC GACCGCAAGA TCAGCCTGTT CGAGATCGCC
GCCAAGGAGA AGGGCACGCG CCTCAGCGTC GACTCCACCG GCGAGGTCGA CGGACCGTCG
TGGCCGAACG GCGCGCATAT CTGCGAGGTC GAGGTCGATC CCGAGACCGG CGTCAGCCGG
GTGGTGCGCT ACACCACCGT GGACGACGTC GGCAATGCGG TGAACCCGAT GCTGGTCGCC
GGCCAGATCC ATGGCGGCGT CGCCCAGGGC GTCGGCCAGG CGCTGTACGA GAACGCCGCC
TACAATGACG ACGGTCAGCT CCTGACCGCG AGCTATCTCG ACTACTGCAT CCCGCGCGCC
GACAACCTGC CGCCGATCAA CGTCACGCTC GATCCGTCGG CGCCGTGCAA GACCAATCCG
CTCGGCGCCA AGGGCTGCGG CGAATCCGGC GCGATCGGCG GTCCGCCCTG CGTGGTGCAC
GGTGTGCTCG ACGCGCTGGC CCCGCTCGGC GTCACCACGC TGAACACGCC GCTGACCCCG
GAAAAGGTCT GGCGCGCGAT CCAGGACGCC AAGTCGGCCC AGGCGGCTTA G
|
|---|
| Protein sequence | MNILPGSMRF GAGQPVKRLE DQRLLTGHGG YLDDKAADGA LWLVVMRSPH AHADIVSIDT
EPAKGMPGVE AVLTGADLVA DDVGTIPTLP IFKRPDGSPM ALPLRRLLAH EKVRFVGEPV
AAVVATSQLA AQAAIEAIAV EYHELPAVTD PTAAIQPGAP AVWAETPDNI VAAMSYGDAA
KVDAAFASAA HTVSLDLVSQ RLIPSAMEPR STIAEIEKKT GRLILHTQSQ TPGQTRDALA
EAILKRPKES IQVLVGDIGG GFGQKTGVYP EDALVAYAAV KLNRKIRWRG ERTDEFIGGT
HGRDLTSTAS FALDSKGKVL AYRVTSIGGT GAYLAGAGVI IPLVLGPFVQ TGVYHLPVVH
FDIKAVMTHT APVGAYRGAG RPEAVYIVER LMDAAARKLN MDPRAIRKIN YIKPSQLPYT
NAVGQVYDSG AFAHMMDRAA ELSDWDGFKA RKKAAQKKGL LYGRGVTSYI EWTGGRAHTE
NVKLHATGEG RVVLHSGTQA MGQGLETTYT QMIAAALEIP LDKIDVVQGN TDLAIGFGSV
GSRSLFVGGT AVAVSSAEMI AKAREKAANI LEASIEDIEY SGGMLTIAGT DRKISLFEIA
AKEKGTRLSV DSTGEVDGPS WPNGAHICEV EVDPETGVSR VVRYTTVDDV GNAVNPMLVA
GQIHGGVAQG VGQALYENAA YNDDGQLLTA SYLDYCIPRA DNLPPINVTL DPSAPCKTNP
LGAKGCGESG AIGGPPCVVH GVLDALAPLG VTTLNTPLTP EKVWRAIQDA KSAQAA
|
|---|
| |