| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1758 |
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| Symbol | |
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| ID | 6409415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1887378 |
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| End bp | 1889495 |
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| Gene Length | 2118 bp |
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| Protein Length | 705 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711646 |
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| Product | Oligopeptidase B |
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| Protein accession | YP_001990761 |
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| Protein GI | 192290156 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1770] Protease II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0951116 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCTCTG CCCCGCCCCG TGCCGCCAAC CAGCAACCGC CGGTCGCGCC GCGCCGTCCG
CATGAATTCA CCACCCACGG CATCACGCTG ACCGACGACT ATGCCTGGCT GAAGGATCCG
AACTGGCAGG AGGTGCTGCG CGATCCGTCG CTGCTCGATC CCGATATCCG CACCTATCTC
GAAGACGAGA ACGGCTACAC CGACAGCGTG CTTGGCCACA CCACGAGTTT GCAGAAGAAG
CTGGTCGCCG AGATGCGCGG GAGGATCAAG GAGGACGATT CCAGCGTCCC CTCGCCGGAT
GGTCCTTACG CTTACTTGCG CAAATATCGC GAGGGCGGCC AGCACCCGCT GTACGGCCGC
GTCGCGCGCG ACGGCAGCGG CGAGATCGAC ATCGTCCTCG ACGGTGACGA GCTTGCCAAG
GGCCACGACT ACTTCCAGTT CGGCGACCGT CGGCACTCGC TCGACCACAA GCTGGAAGGC
TGGAGCGCCG ACACCAAGGG CTCCGAATAC TACACCATCC GCGTCCGCGA CTGGACGACC
AAGCAGGACC TGCCCGACGT GGTCGAGGAG ACCGACGGCG GCCTGGTGTG GACCGCGGAT
TCGACCGCAT TCTTCTACGT CAAGCTCGAC GACAACCACC GCCCGATGCA GGTGTGGCTG
CACAAGCTCG GCACCCAGCA GGCCGACGAT CTTCTGATCT ACGAAGAGCC GGACTCCGGC
TGGTTCACCC ACATCCACGA GAGCACCAGC GGCCGGTTCT GCGTCATCGC CGGCGGCGAT
CACGAGACCT CCGAGCAGCG GCTGATCGAT GTCTCCGACC CGACCGCGCC GCCGCGCCTC
GTCGCCAAGC GTGAACTCGG CGTGCAATAT TCGCTCGGCG ATCGCGGCGA CGAATTGTTC
ATCCTCACCA ATGCCGACGG TGCGATCGAC TTCAAGATCG TCACCGCGCC GCTGGCTGAG
CCGACCCGCA ACAACTGGCG CGATTTGATT CCGCACCGCG CCGGGATCTA TGTGATCGAT
TTCGATCTCA CGACCGGCCA TCTGATCCGG CTGGAGCGCG CCAATGCGCT GCCCTCGATC
ACCATCCGCG ACCTGAAGAC CGGCGACGAG CACGCCATCG CGTTCGCCGA GACCGCATAT
TCGCTCGGCA CCATCGGCGG CTACGAGTTC GACACCACGA ACCTGCGGTT CTCGTATTCG
TCGATGACGA CGCCGTCGGA AGTCTATGAC TACGACATGG CGACGCGGCA GCGGACCTTG
CGCAAGCGCC AGGAAATTCC CTCCGGCCAC AATCCGGCCG ACTACGTCAC CACCCGGATC
ATGGCGAAGG CCGGCGACGG CGCCGAGGTG CCGGTGTCGA TCCTGCATCG GGCCGGCCTC
AAGCTCGACG GCCAGGCGCC GCTGCTGCTG TATGGCTACG GCTCCTACGG CCATGCAATG
GGCGCCGGCT TTTCGGCCAA CGCACTGTCG CTGGTCGACC GCGGCTTCGT CTATGCGATC
GCCCACATCC GCGGCGGCGC CGACAAGGGC TGGGGCTGGT ATCTGGACGG CAAGCGCGAG
AAGAAGACCA ACTCGTTCGA CGATTTCGCC GCCAGCGCCC GCGCGCTGAT TGCGGCGAAC
TACACCTCGC CCAAGCGCAT CGTCGCCCAC GGCGGCAGCG CCGGCGGCAT GCTGATGGGC
GCCGTCGCCA ATCGCGCCGG TGAGCTGTTC GCCGGCATCG TCGCCGAGGT GCCGTTCGTC
GACGTGCTCA ACACCATGCT GGACGACACC CTGCCGCTGA CCCCTCCCGA GTGGCCGGAG
TGGGGCAATC CGATTGCGAG CGAAGCCGAC TTCAAGACCA TCCTGTCGTA TTCGCCCTAC
GACAACGTCG CGGCCAAGGA GTATCCGGCG ATCCTGGCGA TGGGCGGCCT CACCGATCCG
CGCGTCACCT ATTGGGAGCC GGCCAAATGG GTCGCGCGGC TGCGCGCCAC CATGACCGGC
GGCGGCCCGG TGCTGCTCCG TATCAACATG GGCGCCGGCC ACGGCGGCGC CTCCGGCCGC
TTCAGCCGCC TCGACGAGAT CGCGATCGTC TATGCGTTCG CGCTGTGGGC GGTTGGCCTG
GCTGACGCCA CCGCGTGA
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| Protein sequence | MTSAPPRAAN QQPPVAPRRP HEFTTHGITL TDDYAWLKDP NWQEVLRDPS LLDPDIRTYL
EDENGYTDSV LGHTTSLQKK LVAEMRGRIK EDDSSVPSPD GPYAYLRKYR EGGQHPLYGR
VARDGSGEID IVLDGDELAK GHDYFQFGDR RHSLDHKLEG WSADTKGSEY YTIRVRDWTT
KQDLPDVVEE TDGGLVWTAD STAFFYVKLD DNHRPMQVWL HKLGTQQADD LLIYEEPDSG
WFTHIHESTS GRFCVIAGGD HETSEQRLID VSDPTAPPRL VAKRELGVQY SLGDRGDELF
ILTNADGAID FKIVTAPLAE PTRNNWRDLI PHRAGIYVID FDLTTGHLIR LERANALPSI
TIRDLKTGDE HAIAFAETAY SLGTIGGYEF DTTNLRFSYS SMTTPSEVYD YDMATRQRTL
RKRQEIPSGH NPADYVTTRI MAKAGDGAEV PVSILHRAGL KLDGQAPLLL YGYGSYGHAM
GAGFSANALS LVDRGFVYAI AHIRGGADKG WGWYLDGKRE KKTNSFDDFA ASARALIAAN
YTSPKRIVAH GGSAGGMLMG AVANRAGELF AGIVAEVPFV DVLNTMLDDT LPLTPPEWPE
WGNPIASEAD FKTILSYSPY DNVAAKEYPA ILAMGGLTDP RVTYWEPAKW VARLRATMTG
GGPVLLRINM GAGHGGASGR FSRLDEIAIV YAFALWAVGL ADATA
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