| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1752 |
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| Symbol | |
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| ID | 6409409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1880342 |
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| End bp | 1881658 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642711640 |
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| Product | putative UreA/short-chain amide transport system substrate-binding protein |
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| Protein accession | YP_001990755 |
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| Protein GI | 192290150 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.225612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGTTTG ACCGTCGGCA GCTTTTGCTC GGAGGAGTCG GCGCCGCAGC CGGGCTCGCG
CTTCCTGGAA GTGCATTTGC GCAATCGCCG GCGGCGATCG GAACCTTTCC GGCAGGTGTT
TCGGCCGACT CGGTGTTCGT AGGCCTGACC ATTCCGCTCA CCGGGGTTTT CTCGGGCGAT
GGCGGCGACC TCAAGCTCGG CTATGAGCTG GCGATCGCGC AGATCAACGC CGGTAGCGAG
ATCGCGCAGC AATGGGGACT CAAGGGCAAG GGAGTGCTGG GCCGGCAAAT TCGCCACAAG
GTCTCGGACA CCGAGGGCAA GCCGAACCTC GATGTGCAGA GCGCCACGCA GTTCATCCAG
CGCGACAAGG CCATCATGGT GTCGGGCTCG GTGTCGAGCT CCAGCGCGAT CGCGCTCGAA
GAGCTCGGGT CGCGCGAGAA AGTGCTGTAC ATGGTCGGCA TCGCCGGCTC CAACGACATC
ACCGGAAAGA ATTGCCAGCG CTACGGATTC CGCTCTCAGC AGAACGCCTA TATGGCGGCC
AAGGGCCTCG CTCCGGTGGT GGCGAAGGCG CTCGGCAAGA ACGTCAAGAT GGCCTTCCTG
GTGCCCGACT ACACCTACGG CCACAGCGTG TATGACAGCT TTTCCAAGTT CGCGACCGAG
CAGGGCTGGA AGCAGGTTGC CAAGGAAGTG GTGCCGCTCG GGACCACCGA TTACTCCTCG
GCGTTGCTCA ATATCGCCAA CAGCGGCGCC GATGTGTTCG TCAACATCGC CTTCGGTGCC
GACTCCGTCG CCTCGACTAA GCAGGCCGAG CAGTTCGGTG TGCTGAAGCG GATGAAGCTC
GTCGTGCCCA ATCTGTCGTC GTTCCAGGAC AAGGAGCTCG GCGCCGAGTT GATGCAGGGG
GTCTACGGAA GCTGTGATTT CTGGTTCGGT CTGCAGGACA AGTTCCCGCT CGCCAAGGCG
TTCGTCGACA GCTTCGTCGC GCAGAACAAT TACCATCCGC GCTGGGGTGC CCATATCGGC
TACATGCAGA CCTATCTGTG GGCCATGTCG GTCGAGCGCG CCAACACCTT CAATCCGGTG
GACGTGATCA AGGTGATGGA GAATTCCAAG GCGCAGCCAT ACGTCACGAC GATCGGCAAA
GTGTATTTCC GCGCCGAGGA CCATCAGATG GTGCGCCCGA TCCCGATTCT GCGCGGCAAG
AAGCCGGCGG AGATGAAGCA CAAGGAAGAC TTCTACGACA TCATCGACCT CGTCGACGGC
GAGGCCGTGA TGAATCCGCC GGACCTGTTC GGTTGCAAGC TCGGCCCCTA CACCTGA
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| Protein sequence | MQFDRRQLLL GGVGAAAGLA LPGSAFAQSP AAIGTFPAGV SADSVFVGLT IPLTGVFSGD
GGDLKLGYEL AIAQINAGSE IAQQWGLKGK GVLGRQIRHK VSDTEGKPNL DVQSATQFIQ
RDKAIMVSGS VSSSSAIALE ELGSREKVLY MVGIAGSNDI TGKNCQRYGF RSQQNAYMAA
KGLAPVVAKA LGKNVKMAFL VPDYTYGHSV YDSFSKFATE QGWKQVAKEV VPLGTTDYSS
ALLNIANSGA DVFVNIAFGA DSVASTKQAE QFGVLKRMKL VVPNLSSFQD KELGAELMQG
VYGSCDFWFG LQDKFPLAKA FVDSFVAQNN YHPRWGAHIG YMQTYLWAMS VERANTFNPV
DVIKVMENSK AQPYVTTIGK VYFRAEDHQM VRPIPILRGK KPAEMKHKED FYDIIDLVDG
EAVMNPPDLF GCKLGPYT
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