| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1746 |
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| Symbol | |
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| ID | 6409403 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1872314 |
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| End bp | 1875025 |
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| Gene Length | 2712 bp |
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| Protein Length | 903 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711634 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001990749 |
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| Protein GI | 192290144 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGACT TCAAAGACGC CAAGCGGAAG TTCGAAGGCG CACCGGTTCC CGCGCCGCGA
CGGCCGGTGC GACGGGGCGG GCGTGCCTTG ATCCGACTTT TCGGGGTCGC GGTGATCGTC
TCGCTCAGCG TCATGGCGGG ACGGATCGCC TCGCAGCACA CCCGCGCCTG GGAGCCTCCC
GGCGTCGGGC ACGGGCTGGA CGTGCCCTGG TGGATCTTTG TGATCTCGCT CGCGGTCGGC
CTGTCGATCG CCGGCCTGAT CGAGCTGCAA CTGTCGCGCT ACGAGCGGCG CAACGCGCAC
AAGCTCCGGC AGGCGCATCT GGCGGCGATC GTCGAGGGAT CGAGCTACGC GATCGTCGGC
CAGTCGATCG ACGGCACGGT GCTGAGCTGG AACAAGACCG CCGAGCGGCT GTTCGGCCAC
ACCGCCGAGC GGGCGATTGG CCAGAATGCC ACCGAGCTGA TGGTCCCGGA CGATCTGCGC
GACGAAGAGC AGCAGATGCT GTCCGGCATC AGCGACGGCA CCGCGTTCGC GTATCTCTGG
ACCAAGCGCA AGCGGGCGAA CGGCACGCTG GTCGATGTCG CGGTCAGCAT CTCGCCGATC
CGCGCCGATG ACGGCCGGTT GATCGGGATG GCGGCATCGA TGCGCGACAT CACCGACCTG
GTGCAGGCGG AGCGCGAGGT TCACGACCTC AACGCCGCGC TGGAGCGGCA GGTCGCCGAA
CGCACCTGCC AGCTCGAAAA GACCCTGACG CTGCAGACAG CCATCCTGGA ACGCGCCGCC
TATGCGGTGA TCGCCACCGA CGTCACCGGC ACCATTACGC TGTTCAATCC GGCCGCCGAG
CGCATGCTGG GCTACAAGGC CGAGGACCTG ATCGGCCGGG CGAGCGCGAT GCTGTTCCAC
GATTCCGACG AACTCGCCGC GCGCGCCGAG GCGATGCGGA AAGAGGGCAT CTCGGTCAGC
TCCAATCTCG GCGTGCTGCA GGCTCGCCTG GCCCGCAACG ATCCCGACAC CGCGATGTGG
ACCTACATCG ATGCGATGGG CAACCGGATC CCGACCCGGC TCACGCTCAG CCGGCTGCGC
ACCAAGACCG GCGTCAATCT CGGCGTCCTG GGGATCGCCG TCGACTTGAC CGAGCAGCTG
AAATACGAGG ACGAGCTCAA GGCCGCGCGC GCCAGCGCCG AGCAGGCCAG TGCCGCCAAG
GCAGATTTCC TCGCCAATAT GAGCCACGAA ATCCGTACCC CGCTGAACGG CATCATCGGC
TATGCCGATC TCGTGCTGGA GGACGAGACG CTGGCGCCGG ATACGCGCCG TCAGGTGATG
CGGATCTTCG AGGCCAGCGA CTCGCTGCGG GTGATCATCG ACGACATCCT CGATTTCTCG
AAGATCGAAG CCTGCGGGCT CACCCTGGAA AGCAAGCCGC TCTACATCAA CGAGCTGATC
GCCAATTGCG CCTCGATCAT CGAGCCGAAG GCAGATGAGA AGGGGCTGAA GCTGATCGCG
ACCGCCCAGG CGACGCCGCC GGTGCTGATC GGCGACGCAG GGCGGCTGCG GCAGGTGCTG
CTCAACCTGA TGAACAACGC CGTCAAGTTC ACCACGGCCG GCTCGGTCGA GCTGATCGTG
TCGTGCATCG GGCGGGTTGA TCATCTGGTC CGGCTGCGCA TTTCCGTCGC CGACACCGGC
ATCGGCATCT CGCCGGAGGC GCAGAAGGGG CTGTTCAAGC GTTTCAGCCA GGCCGACGAG
ACGATCTCGC GCAAATTCGG CGGCACCGGG CTCGGGCTGG CGATCTCGCA GCGGATCGTC
CAGGCGATGC ACGGCGAACT CAAGATCGAC AGCCAGCCGG GTGTCGGCAG CACGTTCTAT
TTCGAAGTCG AGTTGCCGGT CGCCGAGCGG CTCGATATCG AGCGGCTCGA TGCGCAGGTC
CATTGCAGTC GTTCGGTCAA GATCCTGGTG GTCGACGACG TCGAGATGAA CCGCGATCTG
TGCAAGACGA TGCTGACCAG GGCCGGCCAC GACGTCGATC TCGCCGACAG CGGCGCCACG
GCGATCGCGA TGGTCGCGAG CCGCACCTAC GACCTGATCT TCATGGACGT TCAGATGGGC
GAAATGGACG GGCTCGAAGC CACCCGTCGC ATCCGTGCGC TCGGTCATGC TTACCGGGAC
GTGCCGATCA TCGCGCTCAC GGCCAACGTG CTTCCCGAAC AGGTGGAGCG CTATAAGGCG
GCGGGCGTCG ACGGCCATCT CGGCAAGCCG ATCAATCGCG CCGAACTGCT GGCCTGCGTG
GCGCGATGGA TCGACGGCGA TATCGCGCAC GTGCCGTCCG AGCCATTGGC GCCTGTCGAG
CTTGGCTCCG AGCCGGAGCA TCCGGTACGC GATCAGGCTG CGCTCGAAGA TCTGCGGATG
TTTGCCAGCG AGCACGATAT CGCGGGCTTT GCCGAGCAAC TCCGCGACAC CATCACGCGC
ATCAGGACGC AGTGGCCACA CCACATCGAC GCGATGAAAC TCGATCACGA GGCGCGGACC
GCGCTCGGCG CCGCAGCTCA CAAGACCGTG TCGCTCGCCG GTCAGCTCGG CTTCAAGCAG
TTAGCAGCGG CGTGTCGCCG GATGGAGGCC GCCTGCGCGC CTCACAGGGA TATCCACGAC
GCGTTTGCGG CGCTGCATGC CGCGCTCGAC AACGCCGAGC CGGTGCTCGA CGCCCCGTAC
GAGCTGACCT GA
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| Protein sequence | MNDFKDAKRK FEGAPVPAPR RPVRRGGRAL IRLFGVAVIV SLSVMAGRIA SQHTRAWEPP
GVGHGLDVPW WIFVISLAVG LSIAGLIELQ LSRYERRNAH KLRQAHLAAI VEGSSYAIVG
QSIDGTVLSW NKTAERLFGH TAERAIGQNA TELMVPDDLR DEEQQMLSGI SDGTAFAYLW
TKRKRANGTL VDVAVSISPI RADDGRLIGM AASMRDITDL VQAEREVHDL NAALERQVAE
RTCQLEKTLT LQTAILERAA YAVIATDVTG TITLFNPAAE RMLGYKAEDL IGRASAMLFH
DSDELAARAE AMRKEGISVS SNLGVLQARL ARNDPDTAMW TYIDAMGNRI PTRLTLSRLR
TKTGVNLGVL GIAVDLTEQL KYEDELKAAR ASAEQASAAK ADFLANMSHE IRTPLNGIIG
YADLVLEDET LAPDTRRQVM RIFEASDSLR VIIDDILDFS KIEACGLTLE SKPLYINELI
ANCASIIEPK ADEKGLKLIA TAQATPPVLI GDAGRLRQVL LNLMNNAVKF TTAGSVELIV
SCIGRVDHLV RLRISVADTG IGISPEAQKG LFKRFSQADE TISRKFGGTG LGLAISQRIV
QAMHGELKID SQPGVGSTFY FEVELPVAER LDIERLDAQV HCSRSVKILV VDDVEMNRDL
CKTMLTRAGH DVDLADSGAT AIAMVASRTY DLIFMDVQMG EMDGLEATRR IRALGHAYRD
VPIIALTANV LPEQVERYKA AGVDGHLGKP INRAELLACV ARWIDGDIAH VPSEPLAPVE
LGSEPEHPVR DQAALEDLRM FASEHDIAGF AEQLRDTITR IRTQWPHHID AMKLDHEART
ALGAAAHKTV SLAGQLGFKQ LAAACRRMEA ACAPHRDIHD AFAALHAALD NAEPVLDAPY
ELT
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