| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1745 |
|---|
| Symbol | |
|---|
| ID | 6409402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1871462 |
|---|
| End bp | 1872298 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642711633 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001990748 |
|---|
| Protein GI | 192290143 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCC CTGTGATCCT GATTGCTGAC GATGATCCGG CGGTTTTGGC CGCGTTGTCG
GCGCGATGCC GAAAGATCGG CTTCGAGGTC GACACCGCCA CCAACGGGCT GCAGATGCTG
CTCAAGGCGC GGCGCAAGTC GCCGGACCTG ATCATCGTCG ACATCAACAT GCCGAAGCTC
GACGGGCTCA CCGCCTCGTT TCACCTGCTC GAACCGGGCG GCCTGCCGGT CGACGTCATC
GTCGTCACCG GCGTCACCTG CGAGGAGACG CTGGAGCGCT GCGAGGCGAT GGGGATGTTC
TACGCCTGCA AATGTGAGCA GTTCTGGCAT CACATCAGCC GCGCGCTCAC CGAGATCTTT
CCGCAGATGG CCGAAGCGAT CGCCGAGCAC ACCGGGCCGC TGATCGCCGG GCCCGATGTG
CTTCCGATCC GGCCCCGCGT GCTGGTGGTC GACGACGACG AGCAGGTCGG CCAATTCCTG
GCGAGCCGCC TGAAGAAGCT CGGGATCGAG GTGCTGTATG CACCGAACGC CGCCCGTGCG
TTACGGATCG CGGCCGGTCA GTATCCGAGC GTGGTGGTCA CCGACTATCA CATGCCGGAA
GGCGATGCCG ATTTCCTGAT TATGCGGCTG CGCAGCTCGC GCTCGACCGC GCAGATCCCC
GTCATCGTCC TCAGCGGGTG GGAGATCGAT GAAGTCACCG CCAAACTGCT GAAGCGCGAT
ATTCTGGGCT ATTCCGGCGC TATCGCGATC TTCAAGAAGT CGTTCGACGT GCAGGCGCTG
TTCGACACGA TCCAGCAATA CTGCACGGGC GAGTCCAGGC CGGACGCCGC GGTCTAG
|
|---|
| Protein sequence | MSAPVILIAD DDPAVLAALS ARCRKIGFEV DTATNGLQML LKARRKSPDL IIVDINMPKL
DGLTASFHLL EPGGLPVDVI VVTGVTCEET LERCEAMGMF YACKCEQFWH HISRALTEIF
PQMAEAIAEH TGPLIAGPDV LPIRPRVLVV DDDEQVGQFL ASRLKKLGIE VLYAPNAARA
LRIAAGQYPS VVVTDYHMPE GDADFLIMRL RSSRSTAQIP VIVLSGWEID EVTAKLLKRD
ILGYSGAIAI FKKSFDVQAL FDTIQQYCTG ESRPDAAV
|
|---|
| |