Gene Rpal_1744 details

Gene Information

• Locus tag: Rpal_1744
• ID: 6409401
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 1870751
• End bp: 1871440
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642711632
• Product: response regulator receiver protein
• Protein accession: YP_001990747
• Protein GI: 192290142
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAAAAGTC GTATTCTGCA TATTGATGAC GATCCAGCGA TGCTGAAGGT CGTCGCCGCG 
GTGCTATCCC GAGATCCGGA TCTTGAAACC AGGGGGTGCC TTTCCGCCGA AGAGGGCGTG 
CGCGCCGCGG CCGAATGGCT GCCGGACCTG ATCCTTAGCG ACGTTTCGAT GCCGGACGTC 
GACGGCGTGC AATTCCTCGA AGAACTACGC AACCAGCCCG TCACCATGAG CATCCCGGTG 
GTTTTCACCA CGGCGTGCGG CCGGTTCGAC GACATCTCCG ATTTCAAGTC GCTGGGCGCC 
TCCGGCATCA TCGCCAAGCC TTTCAATCTG CGTGAACTGA TCAGCAGCGT GCGCAGCTAT 
CTCGATCTCG CTGCGGCGGC CGCCGACGAT GCCGAACCGC TTCCCGAGGT CGAGATCCGT 
GACCGCTTCA GGGAAGACGC CGCGCTGCTA CGTGAGCTGC GCGAGCCGTT CGAATCCGGA 
GCGGCGCCGG ACGGGCTGCG CCATGTGGCT CACAAGCTGG TCGGCGTCGC CGGGATCTAT 
GGTTTTGCGG CGATCAGCAC GGCTGCGGCC GCGGTCGAGC GCGCGCTGAA ACAGGCGGTG 
CAACACCCAG AATCTCGGAC CGATGTGGTG TCTCGTCTCG ACGAATTGCT CGACCTCTTG 
GACCAGAACA GCGGCCTTCG GCCGGATTGA 

 

Protein sequence

MKSRILHIDD DPAMLKVVAA VLSRDPDLET RGCLSAEEGV RAAAEWLPDL ILSDVSMPDV 
DGVQFLEELR NQPVTMSIPV VFTTACGRFD DISDFKSLGA SGIIAKPFNL RELISSVRSY 
LDLAAAAADD AEPLPEVEIR DRFREDAALL RELREPFESG AAPDGLRHVA HKLVGVAGIY 
GFAAISTAAA AVERALKQAV QHPESRTDVV SRLDELLDLL DQNSGLRPD