Gene Rpal_1724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1724 
Symbol 
ID6409381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1846612 
End bp1847031 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content60% 
IMG OID642711612 
Productcytochrome c class I 
Protein accessionYP_001990727 
Protein GI192290122 
COG category[C] Energy production and conversion 
COG ID[COG3474] Cytochrome c2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.20972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTCAAAA AACTTCTCAC AATTCTCAGC ATCGCCGCTA CCGCCGGATC TCTGTCGATC 
GGCACTGCCT CGGCCCAGGA CGCCAAGGCG GGTGAGGCGG TGTTCAAACA GTGCATGACC
TGCCACCGCG CCGACAAGAA CATGGTCGGT CCGGCTCTGG GCGGCGTCGT CGGTCGTAAG
GCCGGTACCG CGGCTGGCTT CACCTATTCG CCGCTGAACC ACAATTCGGG TGAAGCGGGT
CTGGTCTGGA CCGCCGACAA CATCATCAAC TACCTGAACG ATCCGAACGC GTTCCTGAAG
AAGTTCCTCA CCGATAAGGG TAAGGCTGAT CAGGCGGTCG GCGTCACCAA GATGACCTTC
AAGCTCGCCA ACGAGCAGCA GCGTAAGGAC GTGGTCGCCT ATCTGGCCAC CCTCAAGTAA
 
Protein sequence
MVKKLLTILS IAATAGSLSI GTASAQDAKA GEAVFKQCMT CHRADKNMVG PALGGVVGRK 
AGTAAGFTYS PLNHNSGEAG LVWTADNIIN YLNDPNAFLK KFLTDKGKAD QAVGVTKMTF
KLANEQQRKD VVAYLATLK