Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1724 |
Symbol | |
ID | 6409381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1846612 |
End bp | 1847031 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642711612 |
Product | cytochrome c class I |
Protein accession | YP_001990727 |
Protein GI | 192290122 |
COG category | [C] Energy production and conversion |
COG ID | [COG3474] Cytochrome c2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.20972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCAAAA AACTTCTCAC AATTCTCAGC ATCGCCGCTA CCGCCGGATC TCTGTCGATC GGCACTGCCT CGGCCCAGGA CGCCAAGGCG GGTGAGGCGG TGTTCAAACA GTGCATGACC TGCCACCGCG CCGACAAGAA CATGGTCGGT CCGGCTCTGG GCGGCGTCGT CGGTCGTAAG GCCGGTACCG CGGCTGGCTT CACCTATTCG CCGCTGAACC ACAATTCGGG TGAAGCGGGT CTGGTCTGGA CCGCCGACAA CATCATCAAC TACCTGAACG ATCCGAACGC GTTCCTGAAG AAGTTCCTCA CCGATAAGGG TAAGGCTGAT CAGGCGGTCG GCGTCACCAA GATGACCTTC AAGCTCGCCA ACGAGCAGCA GCGTAAGGAC GTGGTCGCCT ATCTGGCCAC CCTCAAGTAA
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Protein sequence | MVKKLLTILS IAATAGSLSI GTASAQDAKA GEAVFKQCMT CHRADKNMVG PALGGVVGRK AGTAAGFTYS PLNHNSGEAG LVWTADNIIN YLNDPNAFLK KFLTDKGKAD QAVGVTKMTF KLANEQQRKD VVAYLATLK
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