| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1717 |
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| Symbol | |
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| ID | 6409374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1839641 |
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| End bp | 1840564 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642711605 |
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| Product | photosynthetic reaction center subunit M |
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| Protein accession | YP_001990720 |
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| Protein GI | 192290115 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01115] photosynthetic reaction center M subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAAT ACCAGAACAT CTTTACGCAG GTCCAGGTTG AAGGACCTGC CTATGCGGGG
GTGCCGCTAC GTCCCGGCAG CTCTCCTCGC GAAACGCAGA CGACCTTCAA CTACTGGCTC
GGCAAAATCG GTGACGCGCA GGTTGGCCCT GTCTATCTTG GGTTCACCGG TGTGTGCTCC
TTGCTCTGCG GGTTCGTCGC GATCGAGATC ATCGGCCTCA ACATGTTGGC GTCGGTGGAC
TGGAGCCCGA TCGAATTCCT GCGCCAGTTC TGCTGGCTGG CGCTCGAACC GCCGAAGCCG
GAATATGGTC TGACCATTCC GCCGCTGAAG GAAGGTGGCT GGTGGCTGAT GGCCGGGTTC
TTCCTGACCG TCTCGATCGC CCTGTGGTGG GTTCGCACCT ATCGGCGCTC GCGGGCGCTC
GGGATGGGCA CCCACGTGTC GTGGGCGTTC GCTTCCGCGA TCCTGCTGTA CCTGGCGCTC
GGCTTCATTC AGCCGCTGCT GATGGGCTCC TGGAGTGAAG CACCGCCGTT CGGCGTCTTC
CCGCACCTGG ACTGGACCAA CAACTTCTCG ATCAAGTACG GTAACCTGTA CTACAACCCC
TTCCACTGTC TCTCGATCGC CTTCCTGTAT GGCTCGGCCC TGCTGTTCGC CATGCATGGT
GCGACCATCC TCGCTGTGAG CCGCTACGGT GGCGAGCGCG AAATCGAGCA GATGCTGGAC
CGTGGTACTG CACTTGAACG CGCTGCTCTG TTCTGGCGCT GGACGATGGG CTTCAATGCG
ACGGCCGAAT CGATCCATCG TTGGGCTTGG TGGTTTGCGG TGCTCTGCCC GCTGACCGGT
GCCATCGGCA TCATCCTGAC CGGTCCGGTT GTTGACAACT GGTTCGATTG GGGCGTGAAG
CACGGCCTGG CGCCGCCGCG GTAA
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| Protein sequence | MAQYQNIFTQ VQVEGPAYAG VPLRPGSSPR ETQTTFNYWL GKIGDAQVGP VYLGFTGVCS
LLCGFVAIEI IGLNMLASVD WSPIEFLRQF CWLALEPPKP EYGLTIPPLK EGGWWLMAGF
FLTVSIALWW VRTYRRSRAL GMGTHVSWAF ASAILLYLAL GFIQPLLMGS WSEAPPFGVF
PHLDWTNNFS IKYGNLYYNP FHCLSIAFLY GSALLFAMHG ATILAVSRYG GEREIEQMLD
RGTALERAAL FWRWTMGFNA TAESIHRWAW WFAVLCPLTG AIGIILTGPV VDNWFDWGVK
HGLAPPR
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