| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1712 |
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| Symbol | |
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| ID | 6409369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1836340 |
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| End bp | 1837788 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642711600 |
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| Product | chlorophyllide reductase subunit Z |
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| Protein accession | YP_001990715 |
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| Protein GI | 192290110 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01278] light-independent protochlorophyllide reductase, B subunit
[TIGR02014] chlorophyllide reductase subunit Z |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGTCC TCGATCACGA TCGCGCCGGC GGCTATTGGG GCGCCGTGTA CGCCTTCACC
GCGGTGAAGG GCCTGCAGGT GATTATCGAC GGTCCGGTCG GTTGCGAGAA CCTGCCGGTG
ACCTCGGTGC TGCACTACAC CGATGCGCTG CCGCCGCACG AACTGCCGAT CGTCGTCACC
GGCCTCGGCG AAGAAGAACT CGGCAAGCTC GGCACCGAAG GCGCGATGCA CCGCGCCCAC
AAGGCCCTTG ATCCCTATCT GCCGGCAGTC GTCGTCACCG GCTCGATCGC CGAGATGATC
GGCGGCGGCG TCACGCCCGA AGGCACCGGC ATCAAGCGCT TCCTGCCGCG CACGATCGAC
GAAGATCAGT GGCAGAGCGC CGACCGCGCG ATCTCGTGGC TGTGGAAAGA ATACGGCCCG
AAGAAGATTC CCGAGCGCAA GCGCAAGGAC GGCGAGAAGC CGCGGGTCAA CATCATCGGA
CCGATCTACG GCACCTTCAA CATGCCGTCC GATCTCGCCG AAATCCGCCG GCTGATCGAA
GGCATCGGCG CCGAAGTCAA CATGGTGTTC CCGCTCGGGA CGCACCTTGC TGATATTCCC
AAGCTGGTGA ATGCCGACGT CAACGTCTGC ATGTATCGCG AGTTCGGTCG GCTGCTGTGC
GAATCATTGG AGCGCCCGTA CCTGCAGGCG CCGATCGGTC TGCATTCGAC GACGCGCTTC
CTGCGCAAGC TCGGTGAGCT CACCGGCCTC GATCCCGAGC CGTTCATCGA GCGCGAGAAG
AACACCACCA TCAAGCCGCT GTGGGATCTG TGGCGGTCGG TGACTCAGGA CTTCTTCGGC
ACCGCCAGCT TCGCGGTCGT TGCCACGGAT ACCTACGCCC GCGGCGTGCG GCATTTCCTC
GAAGACGAGA TGGGTCTGCC GTGCACCTTC GCGGTCTCGC GCTGCGTCGG CAAGAAGACC
GATAACGAAG CGGTGCGTGC GGCGATTCGC CAGACTCCGC CGCTGATCAT GTTCGGCAGC
TACAACGAAA GAATGTACTT GGCCGAGACC GGTGGTCGCG CCGTGTACAT TCCGGCGTCA
TTCCCGGGTG CTGTGATCCG CCGTCACACC GGCACGCCGT TCATGGGGTA TTCCGGCGCC
ACTTATCTGG TGCAGGAAGT CTGCAACGCG CTATTCGACG CGCTTTTCAA CATCCTGCCG
CTCGGCAGCG ACCTCGATCG CGTCGATCCG ACGCCGGCTC GCCGGCATGA AGAATTGCTG
TGGAGCGATG AAGCCAAGGC GCTGCTCGAC GAAGTGCTCG AGCAGCACCC GGTGCTGGTG
CGGATCTCTG CGGCAAAACG TCTGCGCGAT GCCGCTGAAA ACAGCGCACG TCGTGCCGGA
CAGGAAAAAG TCACTACCGA GTTCGTCAGT AAAGCGCGTG CGGCGCTGCT CGACGGGCAA
TCGGTGTAA
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| Protein sequence | MLVLDHDRAG GYWGAVYAFT AVKGLQVIID GPVGCENLPV TSVLHYTDAL PPHELPIVVT
GLGEEELGKL GTEGAMHRAH KALDPYLPAV VVTGSIAEMI GGGVTPEGTG IKRFLPRTID
EDQWQSADRA ISWLWKEYGP KKIPERKRKD GEKPRVNIIG PIYGTFNMPS DLAEIRRLIE
GIGAEVNMVF PLGTHLADIP KLVNADVNVC MYREFGRLLC ESLERPYLQA PIGLHSTTRF
LRKLGELTGL DPEPFIEREK NTTIKPLWDL WRSVTQDFFG TASFAVVATD TYARGVRHFL
EDEMGLPCTF AVSRCVGKKT DNEAVRAAIR QTPPLIMFGS YNERMYLAET GGRAVYIPAS
FPGAVIRRHT GTPFMGYSGA TYLVQEVCNA LFDALFNILP LGSDLDRVDP TPARRHEELL
WSDEAKALLD EVLEQHPVLV RISAAKRLRD AAENSARRAG QEKVTTEFVS KARAALLDGQ
SV
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