| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1699 |
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| Symbol | |
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| ID | 6409356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1822720 |
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| End bp | 1824255 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642711587 |
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| Product | phytoene desaturase |
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| Protein accession | YP_001990702 |
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| Protein GI | 192290097 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02734] phytoene desaturase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.258971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGATC CTGGCCTCAA TCCTGCTCCC CGTCCTTCTC GCGATCGTGC CCCGCATGCG
GTGGTGATCG GCTCTGGCTT CGGCGGTTTG GCCGCGGCGG TGCGTCTTGG CGCCAAGGGG
TATCGAGTAA CCGTTCTTGA AAAGCTCGAT AAGGCCGGCG GCCGCGCTTA CGTCCACAAG
CAGGACGGCT TCTCATTCGA CGCGGGGCCG ACCATCGTCA CCGCGCCGTA TCTGTTCGAA
GAGCTGTGGA AGCTTTGCGG CAAGCGGATG TCGGACGACA TCACCTTGAA GCCGATGTCG
CCGTTCTATC GCATCCGCTT CGACGACGGC ACGCACTTCG ATTACTCCGA CGACCGCGAC
GCGGTGCTCG ACCAGATCGC CAAGTTCTGC CCGGACGACG TGCCGGCCTA TGACCGCTTC
ATGGCGGCCT CGCACGAGAT TTTCAAAGTC GGTTTCGAGC AGCTCGGCGA TCAGCCGTTC
AGCCACTTCA CCGACATGCT GAAGATCGCG CCGGCGATGA TCAAGCTGGA GAGCTATCGC
AGCGTTTACG GCCTCGTCGC CAAGCACTTC AAGGATCCGA AGCTGCGCCA GGTGTTCAGC
TTCCATCCGC TGCTGATCGG CGGCAACCCG TTCATGTCCA GCTCGGTGTA CTGTCTGATC
ACCTATCTGG AAAAGCAGTG GGGCGTGCAT TCGGCGATGG GCGGCACCGG CGCGCTCGTC
ACCGGTCTGG TTAACCTGAT CGAGGGCCAG GGCAATACGA TCCGCTACAA TCAGGATGTC
CGCCAGATCG TCGTGGAAAA CGGCACCGCA TGCGGCGTCA AGCTCGCCGA TGGCGAGGTG
ATTAAGGCCG ATATCGTGGT GTCCAACGCC GATTCGGCCT CGACTTATCG CTATCTGCTG
CCGCCGGAGA CGCGCAAGCG TTGGACCGAC GCCAAGATCG AGAAGTCGCG CTATTCGATG
AGCCTGTTCG TCTGGTACTT CGGCACGAAG CGCCGCTACG AAGACGTCAA GCACCACACC
ATTCTGCTCG GGCCGCGCTA CAAGGAACTG ATCAGCGACA TCTTCAGCCG GAAGGTGGTC
GCCGAGGATT TCAGCCTGTA TCTGCATCGC CCGACTGCGA CCGACCCGTC GCTCGCGCCG
CAGGGCTGCG ACACTTTCTA CGTCCTGTCG CCGGTGCCGA ATCTGCTCGG TGATACTGAT
TGGCACACCA AGGCCGAGAC TTATCGCGCC TCGATCGCCA AGATGCTCGG TGCGACCGTT
CTGCCCGATC TGGAAAACCA GATCGCTACC TCCAAGATCA CCACGCCGAT CGATTTCCAG
GACCGGCTGT CGTCGTTCCG CGGCGCGGCG TTCGGTCTGG AGCCGGTGTT GTGGCAGAGC
GCCTGGTTCA GGCCGCACAA TCAGAGCGAA GACGTCAAAC GCCTTTATCT CGTCGGCGCC
GGAACGCATC CCGGCGCTGG CCTGCCCGGG GTACTGTCCT CGGCGCGGGT ACTCGATGCG
CTGGTCCCCG AGGCCGACAG TCTGGTGACA TCATGA
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| Protein sequence | MLDPGLNPAP RPSRDRAPHA VVIGSGFGGL AAAVRLGAKG YRVTVLEKLD KAGGRAYVHK
QDGFSFDAGP TIVTAPYLFE ELWKLCGKRM SDDITLKPMS PFYRIRFDDG THFDYSDDRD
AVLDQIAKFC PDDVPAYDRF MAASHEIFKV GFEQLGDQPF SHFTDMLKIA PAMIKLESYR
SVYGLVAKHF KDPKLRQVFS FHPLLIGGNP FMSSSVYCLI TYLEKQWGVH SAMGGTGALV
TGLVNLIEGQ GNTIRYNQDV RQIVVENGTA CGVKLADGEV IKADIVVSNA DSASTYRYLL
PPETRKRWTD AKIEKSRYSM SLFVWYFGTK RRYEDVKHHT ILLGPRYKEL ISDIFSRKVV
AEDFSLYLHR PTATDPSLAP QGCDTFYVLS PVPNLLGDTD WHTKAETYRA SIAKMLGATV
LPDLENQIAT SKITTPIDFQ DRLSSFRGAA FGLEPVLWQS AWFRPHNQSE DVKRLYLVGA
GTHPGAGLPG VLSSARVLDA LVPEADSLVT S
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