| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1684 |
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| Symbol | |
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| ID | 6409341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1803968 |
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| End bp | 1805167 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711572 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001990687 |
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| Protein GI | 192290082 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGGGAT GGACCAAGCT GGGTTGGACG GCCGTTGCGC TCGCCGTCTT GGCGCCGGCA
CTTGCCGGGT GCAAGGAACC GTCCGCCGCC AACGCTTCGG CGGCAGAGAA ACCCGAAGTC
AGCATTGTGA CCGTGAAGCC GCAGCCGCGC TCGATCGTAC GCGAACTGCC GGGCCGGATC
GCGCCGATCC GGGTTGCGGA CGTGCGGCCG CGCGTCTCCG GCATCATTCT GCGCCGGACT
TTCCAGCAGG GCAGCGAGGT GAACGCCGGC GACCCCTTGT ATCAGATCGA TCCGCGCCCG
TTCGAGGTTG AGCTGCAGGC TGCTGAAGCC GCACTGGCCA AGGCCACGGC CGCCCGCGAT
CAGGCCGACA TGCACGCCAA GCGCGTCTCG ATGCTGGCGA GCGAGCAGGC GGCGTCGCGT
GCCGCCAATG AAGTCGCGAC TACTAATCTG CGCCAGGCTG CGGCCGAAGT CGCAGTGCGC
GAAGCGGAAG TCGCGCGCGC CAAGCTCAAT CTGGAATACG CCACCATCCG CGCGCCGATC
AGCGGCCGGA TCGGTGCGGC GCTGGTCAGC GAAGGCGCTC TCGTGGTGCA GAACGATGCC
ACCAGCCTTG CGACGATTCA GCAGCTCGAC CACGTCTATG CCGACTTCAC CCAGCCGGTG
TCCGAGATGG CGCGGCTGCG CCGCGCGTTT GATTCCGGTG AGCTCGACCA GATCGCGGCC
GATGCGGTGC GCGCTCACCT CGTGCTCGAC GACGGCACAC ACTATCCGGA GCACGGCAAG
CTGCTGTTCT CCGATGCCAA GGTCGATGCC TACACCGGAC AGGTGACGCT GCGCGCGGAG
TTCGACAATC CGAAGCGCGA GCTGCTGCCG GGCATGTATG TGCGGGTGCG GATCGAGCAG
GGCATCGACG CCGACGCCCT GGCGGTGCCG GAGCAGGCGG TCCAGCGCAA CAATGGCGGC
GGCAGCGAAG TGTTCGTCGT CAAGGACGAT AATCGCATCG CCGTGCAGGC GGTACGGGTC
GGCGCACAGC AGGATGGTCA TTATCTGGTG CTAGACGGCC TGAAGCCGGG CGAGCGGGTG
GTGGTCGAAG GCTTCCAGAA ATTCGCTGCA GGCGACACCG TGGTGCCGGT GAACGTTGCC
GATCGCCGGT CGGCGGCCGC CGTTCCGACT ACCACGGGTT CGGCGGACGC GGTGCGATAG
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| Protein sequence | MRGWTKLGWT AVALAVLAPA LAGCKEPSAA NASAAEKPEV SIVTVKPQPR SIVRELPGRI
APIRVADVRP RVSGIILRRT FQQGSEVNAG DPLYQIDPRP FEVELQAAEA ALAKATAARD
QADMHAKRVS MLASEQAASR AANEVATTNL RQAAAEVAVR EAEVARAKLN LEYATIRAPI
SGRIGAALVS EGALVVQNDA TSLATIQQLD HVYADFTQPV SEMARLRRAF DSGELDQIAA
DAVRAHLVLD DGTHYPEHGK LLFSDAKVDA YTGQVTLRAE FDNPKRELLP GMYVRVRIEQ
GIDADALAVP EQAVQRNNGG GSEVFVVKDD NRIAVQAVRV GAQQDGHYLV LDGLKPGERV
VVEGFQKFAA GDTVVPVNVA DRRSAAAVPT TTGSADAVR
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