| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1659 |
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| Symbol | |
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| ID | 6409316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1777939 |
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| End bp | 1778952 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711547 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001990662 |
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| Protein GI | 192290057 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.298379 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCACCC TGATCGGCAA ACGCCTGATG TTCGCGATCC CGAGCCTGAT CGGCGTGGTG
ATCGTCACCT TCCTGCTGAC CCGCGCGCTG CCGGGCGATC CGGCTGCTTA CTTCGCAGGC
CCAGCCGCTA GCAAGGAGGC GATCGAGCAG ATCCGCCACA AGCTGGGGCT CGACAAATCG
CTCCCCGAGC AGTTCGTCCG CTACACCACG GAGCTGGCGC AGGGCGATCT CGGCCAGTCG
CTGACGACCG GCCAGCCGGT CGCCACCGAG ATCCGCAACC GCCTGCCCGC CTCCGCCGAA
CTGACGCTGC TCGGGCTCGC GATCGCCGTC GTCATCGCGA TTCCGCTCGG CATCATGGCG
GCGACGCGGC CGGGCTCGTG GATCGATCAC CTCTGCCGCA TCACCACTAC CGCCGGCGTG
TCGCTGCCGG TGTTCTTCAC CGGCCTACTG CTGGTCTATG TATTCTACTT CAAGCTCGGC
TGGTCGCCGG CGCCACTGGG CCGGCTCGAC GTGTTCTACA GCGCGCCGCC CACCGTCACC
GGCTTCTATC TGATCGACAG CCTGATCGCC CGCGACTTCG AAACTTTCCG CTCGGCCCTC
AGCCAGCTCC TCCTTCCCGC GGCAACGCTG GCGATCTTCT CGCTGGCTCC GATCGCCCGC
ATGACCCGCG CCTCGATGCT GGCGATCCTG GCGTCAGATT TCGTCCGCAC CGCGCGGGCC
AGCGGCCTGT CGCCGCGCAA GGTGACCATG ACCTATGCGT TCCGCAACGC CATGCTGCCT
GTGATCACCA CGCTGTCGAT GGTGTTCTCG TTCCTACTCG GCGCCAACGT GCTGGTCGAG
AAGGTGTTCG CCTGGCCCGG CATCGGCTCC TACGCGGTCG AAGCGCTGAT CGCGTCCGAT
TTTGCGCCGG TGCAAGGCTT CGTGCTCACC ATGGCGGTGA TGTACGTGCT GCTCAATCTG
GCGATCGACA TTCTCTACGG CGTGATCGAC CCACGCGTGC GGCTGGAAGG CTAG
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| Protein sequence | MLTLIGKRLM FAIPSLIGVV IVTFLLTRAL PGDPAAYFAG PAASKEAIEQ IRHKLGLDKS
LPEQFVRYTT ELAQGDLGQS LTTGQPVATE IRNRLPASAE LTLLGLAIAV VIAIPLGIMA
ATRPGSWIDH LCRITTTAGV SLPVFFTGLL LVYVFYFKLG WSPAPLGRLD VFYSAPPTVT
GFYLIDSLIA RDFETFRSAL SQLLLPAATL AIFSLAPIAR MTRASMLAIL ASDFVRTARA
SGLSPRKVTM TYAFRNAMLP VITTLSMVFS FLLGANVLVE KVFAWPGIGS YAVEALIASD
FAPVQGFVLT MAVMYVLLNL AIDILYGVID PRVRLEG
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