| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1654 |
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| Symbol | |
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| ID | 6409311 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1773331 |
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| End bp | 1774707 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642711543 |
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| Product | amidase |
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| Protein accession | YP_001990658 |
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| Protein GI | 192290053 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02715] amidohydrolase, AtzE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0838482 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCCT CCGAGACCGC CGCAGCTGTG GCGAACCGGA CCATCACCGC TCTCGCTGCT
ACCGAGGCCG CGCTCGCGCG CATCGCCAAG GCGGATGTGA CGCTCAATGC CTTCACCGAT
GTCGTTGCCG AGCGTGCCCG CGCACGCGCA CGCGAGATCG ATGCGGCAAT CGCGCGCGGC
GAAAGCGTCG GCCCGCTCGC CGGCGTCCCG TTCGCGGTGA AGAATCTGTT CGACGTCGCC
GGCCTCGCCA CCCGGGCCGG CTCCAAAATC AACCGCGACC GCAGCCCGGC CGCCGGCGAC
GCGCCGCTGA TCAAGCGGCT GGAAGCGGCT GGCGCGGTGC TGATCGGCGC GCTCAACATG
GGCGAATACG CCTACGACTT CACCGGCGAG AACATCCACG ACGGCCCGTC GCGCAATCCG
CACGACCCCA CCCGGATGAC CGGCGGCTCC TCCGGCGGAT CAGGCGCTGC GGTCGCCGGC
GGCGAGGTGC CGCTCGCGCT CGGCTCGGAT ACCAACGGCT CGATCCGGGT GCCGTCGTCG
CTGTGCGGCA TCTTCGGACT GAAGCCGACC TATGGGCGGC TGCCGCGCAC CGGCTCATTC
CCGTTCGTGG CAAGCTTCGA TCACCTTGGC CCGCTGGCGC GCAGTGCCGC CGATCTGGCA
TTGGCCTACG ACGCGATGCA GGGGCCGGAC GATGGCGACG CCGCCTGTAC CACGCGTGCC
TCGGAGCCCG TGTCCGGTCT GCTCGCCCAA GGCATCGACG GCCTGCGGAT CGCGAAGGCT
GGCGGTTACT TTGAGACTAA TCTGTTCCCG GAAGCACGCG AAGCTGTCGA TCGCGTGGTC
AAGGCGCTCG GCATCACCCG CTCGGTCGAA CTGCCGGAAG CCGCCCGAGC TCGTGCCGCG
GCTTACGTGA TCAGCACAAC CGAAGGCGCC TCGCTACATC TCGACCGGCT GCGACGACAA
CCAAACGATT TCGACCCCGC CGTGCGTGAC CGGCTGCTGG CCGGCGCGAT GGTGCCGGCA
TCGCTGGTCG ATCGCGCACA GAAATTCCGC CGCTGGTACC GCGCCCGCGT GCTCGAATTG
TTCGAGCAGG TCGACGTCAT CATCGCCCCG GCAACGCCTT GCGTCGCGCC CAAGCTCGGA
CAGGTCACTT TCACGCTCGA CGGCGTCGAG CTTCCGGTAC GCGCCAACGT GGGCATCCAC
ACTCAGCCGA TCTCGTTCAT CGGGCTGCCA GTGGTGGCCG CCCCGATCCC GCTCGAACCG
CTGCCGATCG GGGTGCAGAT CATTGCCGCG CCGTGGCGCG AAGACATCGC GCTGCGCGTC
GCCGCCGCGC TGGAACGCGC CGATGTCGCC CGCGCCCCGC GACCGAAGGA TTTCTGA
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| Protein sequence | MTASETAAAV ANRTITALAA TEAALARIAK ADVTLNAFTD VVAERARARA REIDAAIARG
ESVGPLAGVP FAVKNLFDVA GLATRAGSKI NRDRSPAAGD APLIKRLEAA GAVLIGALNM
GEYAYDFTGE NIHDGPSRNP HDPTRMTGGS SGGSGAAVAG GEVPLALGSD TNGSIRVPSS
LCGIFGLKPT YGRLPRTGSF PFVASFDHLG PLARSAADLA LAYDAMQGPD DGDAACTTRA
SEPVSGLLAQ GIDGLRIAKA GGYFETNLFP EAREAVDRVV KALGITRSVE LPEAARARAA
AYVISTTEGA SLHLDRLRRQ PNDFDPAVRD RLLAGAMVPA SLVDRAQKFR RWYRARVLEL
FEQVDVIIAP ATPCVAPKLG QVTFTLDGVE LPVRANVGIH TQPISFIGLP VVAAPIPLEP
LPIGVQIIAA PWREDIALRV AAALERADVA RAPRPKDF
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