| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1651 |
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| Symbol | |
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| ID | 6409308 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1770388 |
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| End bp | 1772193 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642711540 |
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| Product | allophanate hydrolase |
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| Protein accession | YP_001990655 |
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| Protein GI | 192290050 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR02713] allophanate hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.426553 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAAT TCGAAACCAT CAGTGAAATC GTCGCCGCGC ATCGCGCCGG CACCACCACC
CCCGCGCAGA CGATCGCGCG CTGCTACCAG CGCATCCGCG CCTATGCCGA TCCGGCACTG
TTTATCACCC TGCGCGATGA GGCCGATGCG ATCGCCGAGG CGGTCGCGGT GGCGGCGCGC
GACCCGTCGC TGCCGCTGTA CGGCGTGCCG GTCGCAGTGA AGGACAATAT CGACGTTGCC
GGCCTGACGA CCACCGCCGC CTGCCCGGCA TTTGCATATC AGCCGGCCCA CGACGCCACC
GCGGTCGCCA AGCTGCGCGC CGCCGGCGCG ATCGTGATCG GCAAGACCAA TCTCGATCAG
TTCGCCACTG GTCTCGTCGG CGTGCGCTCG CCTTACGGCG TCCCCCGCAA CGCGATGCGC
AGCGACCTCG TCCCCGGCGG ATCGAGCTCC GGCTCGGCGG TCGCGGTCGG TGCCGGGCTG
GTGCCGCTGT CGCTCGGCAC CGATACGGCG GGCTCGGGCC GGGTGCCGGC GATGCTCAAC
AACATCGTTG GGCTGAAGCC GAGCCTCGGG ATGATTTCGA CCACAGGTGT CGTGCCGGCG
TGCCGCACGC TCGACTGCGT CTCGATCTTC GCATTGACGA CCGATGACGC GATGACCGCG
CTGCGGGTGA TGACGGGGCC AGATGCCGAA GATCCGTTCT CGCGGGAACG GCCGGTGGCG
GCAGTCACCG CGATCCCGAA GCGCGTGCGG CTCGGCGTGC CGCCGCAAGA TCAATTGCAG
TTCTTCGGCG ATGATCTCGC GGCGCGTGGT TATGAGGAAG CGGTCGAGCG CTGGCGAAAG
CTCGGTGCGG AGCTGGTCGA GATCGATGTC GAACCGCTCT ACGAGACGGC GCGGCTGCTG
TACGAAGGGC CATGGGTGGC GGAGCGCTAT CTCACCATCC GGGAGTTGCT GGAGACCCAG
CCGGACGCGG TGCACCCGGT GACGCGGCAG ATCACCCTCG CCGGTGCCAA GCTGTCCGCG
GCAGACACCT TCGCGGCGCT GTACCGGCTG CAGGCGTTAC GTAAGATCGC CGAGCACAGC
TTCGCCGGCA TCGACGCGCT GGTGCTGCCG ACCGCGCCGA CCGCCTACAC GGTCGAACAG
GTGCTGACCG ATCCGATCAC GCTGAACAGC CGGCTCGGCA CCTACACCAA CTTCGTCAAC
CTGCTGGACC TGTGCGGCCT CGCGCTGCCG GCGTCGATCC GCAGCGACGG CATTCCGTTC
GGCATCACCC TGCTGGCGCC TGCCGGCCGC GATGCCGAAC TTGCCGGCCT CGGCCGCGTG
TTCCACGCCG ACACCGCGCT GCCGATGGGC GCCAGCGGCC AGCCCCAGCC GCCGCTCGCC
GAAGTCACTG GCGGTGATGC GCCGGGTGAG ATCGCGATCG CGGTGGTCGG AGCGCATCTT
TCCGGTATGC CGTTGAACCG CGAGCTGACC GCACTCGGTG GCCGACTTCT GTCGGCCACC
GCCACAGCGC CGGACTACAA ACTCTATGCG CTGAAAGGCA CCGTGCCGCC GAAGCCCGGC
CTGCTGCGCG TGGCGCCGGG TAGTGGTTCT GCGATCGCTG TAGAAGTGTG GGCGCTGTCG
CCGGCCGCAT TCGGCTCGTT CGTCGCGGCA ATCCCATCGC CGCTGTCGAT CGGTACGCTG
ACGCTCGCCG ACGGCACCGC GGTGAAGGGC TTCCTCACCG AGCCGGCGGC GATCGAAGGC
GCCCGCGATA TCTCGCATTT CGGCGGCTGG CGCGCCTACA TGGCGGAGCT GGCGGCGACC
GGCTGA
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| Protein sequence | MSQFETISEI VAAHRAGTTT PAQTIARCYQ RIRAYADPAL FITLRDEADA IAEAVAVAAR
DPSLPLYGVP VAVKDNIDVA GLTTTAACPA FAYQPAHDAT AVAKLRAAGA IVIGKTNLDQ
FATGLVGVRS PYGVPRNAMR SDLVPGGSSS GSAVAVGAGL VPLSLGTDTA GSGRVPAMLN
NIVGLKPSLG MISTTGVVPA CRTLDCVSIF ALTTDDAMTA LRVMTGPDAE DPFSRERPVA
AVTAIPKRVR LGVPPQDQLQ FFGDDLAARG YEEAVERWRK LGAELVEIDV EPLYETARLL
YEGPWVAERY LTIRELLETQ PDAVHPVTRQ ITLAGAKLSA ADTFAALYRL QALRKIAEHS
FAGIDALVLP TAPTAYTVEQ VLTDPITLNS RLGTYTNFVN LLDLCGLALP ASIRSDGIPF
GITLLAPAGR DAELAGLGRV FHADTALPMG ASGQPQPPLA EVTGGDAPGE IAIAVVGAHL
SGMPLNRELT ALGGRLLSAT ATAPDYKLYA LKGTVPPKPG LLRVAPGSGS AIAVEVWALS
PAAFGSFVAA IPSPLSIGTL TLADGTAVKG FLTEPAAIEG ARDISHFGGW RAYMAELAAT
G
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