Gene Rpal_1639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1639 
Symbol 
ID6409296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1756131 
End bp1756739 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content67% 
IMG OID642711528 
Productcytochrome c oxidase subunit III 
Protein accessionYP_001990643 
Protein GI192290038 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACG CGATCGCAGC GGGGGTGCCC GCGCTCTCCG ACAGCACCGA CAGCCGGACC 
GAGCCCGGCT CCAGCGCGAT CGACTCGCTG CCCGGTCACC TGATGATGTG GGTGCTGATC 
TTCAGCGAGC TCGCCGCGTT CGGCGCGCTG CTGATCGGGT TCCAGATCGC GCGGGCGCTG 
CAACCTGAAG CGTTCGCGGT CGGGCAGGGG CAGCTCGATC CGGCGCTCGC CGCCGCCAAT 
ACGCTCTGTC TGGTGTCGAG CGGCTGGTTC GCAGCCAAGG CCAGCGCCGC CGCTCGTAAC 
GGTGCGTGCG ACGCGACGTG GCGCTGGACG CTGGGTGCCT GTCTGCTCGG CGCCGCGTTC 
ATCGCCATCA AGCTGTTCGA ATATGCCGGC GAGATCGGCC GCGGCGCTGA CATCGACGGC 
AGCACCTTCT TCACACTGTA CTTCTTGCTC ACCGGGTTCC ACCTGCTGCA TGTCGCGCTC 
GGGATCGCGA TCCTGCTCGG CGTTGCCTGG CACGCCCATG CCGCCGCAGT CGAAAGCGGA 
ACCTGCTTCT GGCACATGGT CGATCTGGTG TGGCTGGTGA TGTTCCCGAT CGTCTATCTG 
ATGCGGTAA
 
Protein sequence
MTDAIAAGVP ALSDSTDSRT EPGSSAIDSL PGHLMMWVLI FSELAAFGAL LIGFQIARAL 
QPEAFAVGQG QLDPALAAAN TLCLVSSGWF AAKASAAARN GACDATWRWT LGACLLGAAF 
IAIKLFEYAG EIGRGADIDG STFFTLYFLL TGFHLLHVAL GIAILLGVAW HAHAAAVESG 
TCFWHMVDLV WLVMFPIVYL MR