| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1636 |
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| Symbol | |
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| ID | 6409293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1751529 |
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| End bp | 1754840 |
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| Gene Length | 3312 bp |
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| Protein Length | 1103 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711525 |
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| Product | Carbamoyl-phosphate synthase L chain ATP-binding |
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| Protein accession | YP_001990640 |
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| Protein GI | 192290035 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG1038] Pyruvate carboxylase
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit
[COG4799] Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGTTCC GAAAACTGCT GATCGCCAAC CGCGGCGAGA TCGCGATCCG TATCGCGCGC
GCCGCCGCCG AGTCCGGCCT CACTACCGTG GCGATCCATC CCGCCGATGA TGCGGCGTCG
CTGCACGTCC GCATCGCCGA TCATGCCGAG CAGATCCCCG GCCGCGGCGC GCGGGCTTAT
CTCGATATCG AAGCGGTGAT CGCGGCGGCG AAGGCGGCGG GTTGCGATGC GCTGCATCCC
GGCTACGGTT TCCTCAGCGA GAACGCCGAT CTGGCGCGGC GCTGCGCCGA GGAGGGCATC
ACCTTCGTCG GGCCGTCGCC AGAGGCATTG CGGCTGTTCG GTGACAAGGT TGCCGCCAAG
GAGCTGGCGA AGCGCTGCGG CGTGCCGATC ATTGCCGGCA CCATCGGGCC GTCGACCCTG
GAAGAGGTGC AGGCGTTCTT CGCCTCGCTT GGCGACAAGC CGGCGGTGAT GATCAAGGCG
ATGGCCGGCG GCGGCGGCCG CGGCATGCGC GTGGTCGAGC GCGCCGAAGA TCTCGCCGAC
GCCTATGCGC GCTGCCAGTC CGAAGCCAAG GCGGCGTTCG GCTATGAGGG CGTCTATGCC
GAGCGCCTGA TCCGCAACGC CCGGCACATC GAAGTGCAGA TCATCGGCGA CCGGCACGGC
AATGTCAGTC AGCTCTGGGA GCGCGAATGC ACCATTCAGC GCCGCAATCA GAAGCTGATC
GAGATCGCGC CGAGCCCGTC ACTGTCGGAG GGACTGCGCA GCCGCATCGT CGAGGCGGCG
AAGACCCTCG CGGCGGCGGC GAACTACGAC AGCCTCGGCA CCTTCGAATT CCTGGTCGAC
AGCGAAGCCG GCGAGGGCGA CGGTGCTTTC GCCTTCATCG AAGCCAATCC GCGGCTGCAG
GTCGAACACA CCGTCACTGA AGAGGTGTTG TCCGTCGATC TGGTGCGCTC GCAGCTTGCG
GTCGCCGGCG GGGCGATGCT GACGGCGCTT GGGCTCGATC AGGCCTCGGT GCCGCGTCCC
CGGGGCTTTG CGATCCAGCT TCGCGTCAAC ATGGAGACGA TGGACGCCAA AGGAGCGACC
AAGCCGACCG GCGGCACGCT GGCGATCTTC GAGCCACCGT CTGGTCCCGG CGTTCGCGTC
GATACGTTCG GCTACGCCGG CTACACCACC AGCGCGGCTT ACGACTCGCT GCTCGCCAAG
GTGATCGTGC ATGGCCGCGG CGATTGGGCC GAGGCGGTCG CCAAGGCGTC CCGTGCGCTG
CGCGAGTTCA GAGTTGGGGG CGTCGCCACC AATATTCCGC TGCTGCAGGC GATCCTCGCG
CACGCCGATT TCAAGGCTAA TCGGGTCAGC ACCAGTTTCA TCGATCGCCA CGTCGCCGAA
CTCGTCGAGG CCGCGCAGCA GTTCGATCGG CCGCTGATCG CGACGGAAGG TGCCGACAAC
GGGAGCAGCG CTGCCGCCGC GGCAAGCAAG GAGCCGGTCC CCGAGGGCGC GGTCGCGATC
GCTGCGCCGC TGCAGGGCAC CGTGGTGGCG ATCACTGTCG CGGAAGGCGA CGTGGTGCGG
CCGGGGCAGC AGCTCGCGGT GATCGAGTCG ATGAAGATGG AGCATCTGGT CGCGGCCGAG
CAGGGTGGTC GCATCCGCCG CATCGTTGCC GCCGACGGCG TGACGCTGAT GCAGGGCGAG
CCGATCCTGT ATTTCGAGCC GCAGGACGTC GAAGGCGACC ACGTGGTCGC CGAAGAGGAT
ATAGATCTCG ATGCGATCCG GCAGGACCTC GCCGAGATGC TGGCGCGGCA GGCCAATACG
CTCGACGAGA ACCGCCCCGA CTCGGTCGGG CGGCGGCGCA AGACCAATCA GCGCACTGCG
CGCGAGAACG TCGCCCAGCT CGTCGACGAA GGCTCGTTCA TGGAATACGG CAGCCTCGCG
ATCGCTGCGC AGCGCCGCCG CCGTCCGCTC GACGACTTGA TCAAGAACAC CCCGGCCGAC
GGCCTCGTCA CCGGTGTCGC CACGATCAAC GCCAAGCAGT TCGGCGAGCA CGTCGCGCGC
TGCATGGTGA TCGCCTACGA CTACACCGTG CTGGCCGGCA CCCAGGGCCA CATGAACCAC
AAGAAGATCG ACCGGATGCT GACGCTGGTC GAGCAGTGGC GGATGCCGCT GGTGTTCTAC
GCCGAAGGCG GCGGCGGCCG GCCAGGCGAC ACAGATCGGC TCGGCATGAC CGGCCTCGAC
GGTCCGTCCT TCGTGCAGTT CGCCAAGCTG TCCGGCCTCG TGCCGGTGGT CGGCGTCGTG
TCCGGCTATT GCTTCGCCGG CAACGCCGCG ATGCTCGGCT GCTGCGACGT CATCATCGCC
ACTCAGAACG CCTCGATCGG CATGGGCGGA CCGGCGATGA TCGAGGGCGG CGGCCTCGGC
GTGTATCACC CGGCCGAAGT CGGCCCGGTG TCGTTCCAGG CGCCGAACGG CGTGGTCGAT
ATTCTGGTGC AGGACGAAGA AGAGGCGACC CGGGTCGCGC AGAAATATCT GTCCTATTTC
CAGGGCGCGG TGAGCGAATG GAAGGCGCCG GATCAGCGGT TGCTGCGGCA GGCGATTCCG
GAGAACCGGC TGCGGGTGTA CGATATCCGC AGCGTCATCG ATCTGATCGC GGACGAAGAC
TCGGTGCTCG AACTGCGCCG CGATTTCGGC GTCGGCATGA TCACCGCCTT CATCAGGATC
GAGGGCAAGC CGTTCGGTCT GATCGCCAAC AATCCGAAGC ATCTCGGCGG CGCGATCGAC
GCCGACGCCG GCGACAAGGC GGCGCGCTTC CTGCAGCTCT GCGATGCGTT CGACATTCCG
ATCGTGTCGC TGTGTGATAC GCCCGGCTTC ATGGTCGGCC CGGAAGCGGA GAAGACCGCG
ATCGTCCGCC ACGTTGCTCG GATGTTCGTC ACCGGCGCCA GCCTTACGGT GCCGCTGTTC
GGCATCGTGC TGCGCAAAGG GTACGGCCTC GGCGCGCAAT CGATGATCGG CGGCGGTTTT
CACGCCTCGT TCTTCACCGC GGCCTGGCCG ACCGGCGAAT TCGGCGGCAT GGGTCTGGAG
GGCTATGTGC GCCTCGGCTT CCGCAAGGAG ATGGAGGCTA TCGCCGATCC GGCCGAGCGC
GAGGCTTACT ACAAGAACAA GGTCGCGGAG CTGTATGCCA ACGGCAAGGC GGTCTCGATC
GCGTCAGTGT TCGAGATCGA CAACGTGATC GATCCGGCCG AGACACGGCG CTGGGTCATG
GCCGGGCTGC GCTCGGTGCC GACGCCGCCG GAGCGCACCG AGCGCAAGCG GCCCTGCATC
GATACCTGGT AG
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| Protein sequence | MPFRKLLIAN RGEIAIRIAR AAAESGLTTV AIHPADDAAS LHVRIADHAE QIPGRGARAY
LDIEAVIAAA KAAGCDALHP GYGFLSENAD LARRCAEEGI TFVGPSPEAL RLFGDKVAAK
ELAKRCGVPI IAGTIGPSTL EEVQAFFASL GDKPAVMIKA MAGGGGRGMR VVERAEDLAD
AYARCQSEAK AAFGYEGVYA ERLIRNARHI EVQIIGDRHG NVSQLWEREC TIQRRNQKLI
EIAPSPSLSE GLRSRIVEAA KTLAAAANYD SLGTFEFLVD SEAGEGDGAF AFIEANPRLQ
VEHTVTEEVL SVDLVRSQLA VAGGAMLTAL GLDQASVPRP RGFAIQLRVN METMDAKGAT
KPTGGTLAIF EPPSGPGVRV DTFGYAGYTT SAAYDSLLAK VIVHGRGDWA EAVAKASRAL
REFRVGGVAT NIPLLQAILA HADFKANRVS TSFIDRHVAE LVEAAQQFDR PLIATEGADN
GSSAAAAASK EPVPEGAVAI AAPLQGTVVA ITVAEGDVVR PGQQLAVIES MKMEHLVAAE
QGGRIRRIVA ADGVTLMQGE PILYFEPQDV EGDHVVAEED IDLDAIRQDL AEMLARQANT
LDENRPDSVG RRRKTNQRTA RENVAQLVDE GSFMEYGSLA IAAQRRRRPL DDLIKNTPAD
GLVTGVATIN AKQFGEHVAR CMVIAYDYTV LAGTQGHMNH KKIDRMLTLV EQWRMPLVFY
AEGGGGRPGD TDRLGMTGLD GPSFVQFAKL SGLVPVVGVV SGYCFAGNAA MLGCCDVIIA
TQNASIGMGG PAMIEGGGLG VYHPAEVGPV SFQAPNGVVD ILVQDEEEAT RVAQKYLSYF
QGAVSEWKAP DQRLLRQAIP ENRLRVYDIR SVIDLIADED SVLELRRDFG VGMITAFIRI
EGKPFGLIAN NPKHLGGAID ADAGDKAARF LQLCDAFDIP IVSLCDTPGF MVGPEAEKTA
IVRHVARMFV TGASLTVPLF GIVLRKGYGL GAQSMIGGGF HASFFTAAWP TGEFGGMGLE
GYVRLGFRKE MEAIADPAER EAYYKNKVAE LYANGKAVSI ASVFEIDNVI DPAETRRWVM
AGLRSVPTPP ERTERKRPCI DTW
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