Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1623 |
Symbol | nifH |
ID | 6409280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1737371 |
End bp | 1738198 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642711512 |
Product | nitrogenase reductase |
Protein accession | YP_001990627 |
Protein GI | 192290022 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1348] Nitrogenase subunit NifH (ATPase) |
TIGRFAM ID | [TIGR01287] nitrogenase iron protein |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCGCA AGGTGGCGAT CTACGGTAAG GGTGGCATCG GCAAGTCGAC GACCACTCAG AATACGGCGG CGGCGCTCGC TTTCTATCAC GACAAGAACG TCTTCATTCA CGGCTGCGAT CCAAAGGCGG ACTCGACCCG CCTGATCCTC GGCGGCAAGC CGCAGGACAC CGTGATGGAC ACGCTGCGCA CGCTCGGCGC AGAGAAGGTC ACGCTCGAAA ACGTCGTGAA GAGCGGCTTC AAGGACATCC GCTGCGTCGA GTCCGGCGGG CCCGAGCCCG GCGTCGGCTG CGCCGGCCGC GGCGTCATCA CCGCGATCGA CCTGATGGAA GCCAACAAGG CCTACACCGA CGATCTCGAT TTCATTTTCT TCGACGTGCT CGGCGACGTC GTGTGCGGCG GCTTCGCGAT GCCGATCCGC GACGGCAAGG CACAGGAAGT CTACATCGTG GCCTCCGGCG AGATGATGGC GATCTACGCC GCCAACAACA TCTGCAAGGG CCTCGTCAAA TACGCCAAGC AGAGCGGCGT GCGACTCGGC GGCATCATCT GCAACAGCCG CAAGGTCGAC GGCGAGCGCG AATTCCTCGA AGAATTCACC GCGGCGATCG GCACCAAGAT GATTCACTTC GTGCCGCGCG ACAACATCGT GCAGAAGGCC GAATTCAACA AGAAGACCGT CACCGAATTC GATCCCGCCG CCGAGCAGGC CCATGAATAC AAGCAGCTCG GCGCCGCCAT CATCGACAAC AAGGACTTCG TGATTCCGAA GCCTCTGACG ATGGATCAGC TCGAAGCGAT GGTCGTGAAG TACGGCCTGA TGGACTGA
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Protein sequence | MTRKVAIYGK GGIGKSTTTQ NTAAALAFYH DKNVFIHGCD PKADSTRLIL GGKPQDTVMD TLRTLGAEKV TLENVVKSGF KDIRCVESGG PEPGVGCAGR GVITAIDLME ANKAYTDDLD FIFFDVLGDV VCGGFAMPIR DGKAQEVYIV ASGEMMAIYA ANNICKGLVK YAKQSGVRLG GIICNSRKVD GEREFLEEFT AAIGTKMIHF VPRDNIVQKA EFNKKTVTEF DPAAEQAHEY KQLGAAIIDN KDFVIPKPLT MDQLEAMVVK YGLMD
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