Gene Rpal_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1623 
SymbolnifH 
ID6409280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1737371 
End bp1738198 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content61% 
IMG OID642711512 
Productnitrogenase reductase 
Protein accessionYP_001990627 
Protein GI192290022 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1348] Nitrogenase subunit NifH (ATPase) 
TIGRFAM ID[TIGR01287] nitrogenase iron protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCA AGGTGGCGAT CTACGGTAAG GGTGGCATCG GCAAGTCGAC GACCACTCAG 
AATACGGCGG CGGCGCTCGC TTTCTATCAC GACAAGAACG TCTTCATTCA CGGCTGCGAT
CCAAAGGCGG ACTCGACCCG CCTGATCCTC GGCGGCAAGC CGCAGGACAC CGTGATGGAC
ACGCTGCGCA CGCTCGGCGC AGAGAAGGTC ACGCTCGAAA ACGTCGTGAA GAGCGGCTTC
AAGGACATCC GCTGCGTCGA GTCCGGCGGG CCCGAGCCCG GCGTCGGCTG CGCCGGCCGC
GGCGTCATCA CCGCGATCGA CCTGATGGAA GCCAACAAGG CCTACACCGA CGATCTCGAT
TTCATTTTCT TCGACGTGCT CGGCGACGTC GTGTGCGGCG GCTTCGCGAT GCCGATCCGC
GACGGCAAGG CACAGGAAGT CTACATCGTG GCCTCCGGCG AGATGATGGC GATCTACGCC
GCCAACAACA TCTGCAAGGG CCTCGTCAAA TACGCCAAGC AGAGCGGCGT GCGACTCGGC
GGCATCATCT GCAACAGCCG CAAGGTCGAC GGCGAGCGCG AATTCCTCGA AGAATTCACC
GCGGCGATCG GCACCAAGAT GATTCACTTC GTGCCGCGCG ACAACATCGT GCAGAAGGCC
GAATTCAACA AGAAGACCGT CACCGAATTC GATCCCGCCG CCGAGCAGGC CCATGAATAC
AAGCAGCTCG GCGCCGCCAT CATCGACAAC AAGGACTTCG TGATTCCGAA GCCTCTGACG
ATGGATCAGC TCGAAGCGAT GGTCGTGAAG TACGGCCTGA TGGACTGA
 
Protein sequence
MTRKVAIYGK GGIGKSTTTQ NTAAALAFYH DKNVFIHGCD PKADSTRLIL GGKPQDTVMD 
TLRTLGAEKV TLENVVKSGF KDIRCVESGG PEPGVGCAGR GVITAIDLME ANKAYTDDLD
FIFFDVLGDV VCGGFAMPIR DGKAQEVYIV ASGEMMAIYA ANNICKGLVK YAKQSGVRLG
GIICNSRKVD GEREFLEEFT AAIGTKMIHF VPRDNIVQKA EFNKKTVTEF DPAAEQAHEY
KQLGAAIIDN KDFVIPKPLT MDQLEAMVVK YGLMD