| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1622 |
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| Symbol | |
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| ID | 6409279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1735753 |
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| End bp | 1737321 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642711511 |
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| Product | nitrogenase alpha chain |
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| Protein accession | YP_001990626 |
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| Protein GI | 192290021 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
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| TIGRFAM ID | [TIGR01284] nitrogenase alpha chain
[TIGR01861] nitrogenase iron-iron protein, alpha chain
[TIGR01862] nitrogenase component I, alpha chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATATC ACGAGTTCGA CTGTTCGAAA TGTCTGCCCG AACGCCAGAA GCACGCCGTC
ACCAAGGGCG CCGGCGATAA TCTCGCCACC GCGCTGCCGC TCGGCTATCT CAACACGATC
CCGGGATCGA TCTCGGAGCG CGGCTGCGCC TATTGCGGCG CAAAGCATGT GATCGGCACG
CCGATGAAGG ACGTGATTCA CATGAGTCAC GGCCCCGTCG GCTGCACCTA CGACACCTGG
CAGACCAAGC GCTATATCTC CGACAACAAC AACTTCCAGC TCAAATACAC CTTCGCCACC
GACGTCCGCG AGAAGCACAT CGTATTCGGC GCCGAAGGCC TTCTGAAGCA GAACATCATC
GAGGCTTTCA AAGCCTGCCC CGACATCAAG CGGATGACGA TCTACCAGAC CTGCGCCACC
GCGCTGATCG GCGACGACAT CAATGCTGTC GCCGCCGAGG TGATGGAGGA GATGCCGGAC
GTCGACATCT TCACCTGCAA CTCGCCAGGC TTCGGCGGCC CCAGCCAGTC CGGCGGCCAC
CACAAGATCA ACATCGCCTG GATCAACGAC AAGGTCGGCA CCGTCGAGCC CGAGATCACC
TCGGATTACG TCATCAACTA TGTGGGCGAA TACAACATCC AGGGCGACCA GGAGGTGATG
CTCGACTATT TCACCCGGAT GGGTATCCAG GTGCTGTCGA CCTTCACCGG CAATGGCACC
TATGACGGCC TGCGGGCGAT GCACCGCGCG CATCTCAACG TGCTCGAATG CGCCCGTTCG
GCCGAATACA TCTGCAACGA GCTGCGCGTC CGCTACGGGA TTCCGCGGCT CGACATCGAC
GGCTTCGGCT TCGAGCCGTT GTCGCAGTCG CTGCGCAAGA TCGGGATGTT CTTCGGCATC
GAAGACCGCG CCGAAGCGAT CATCGCCGAA GAGACCGCGC GCTGGAAGCC GGAGCTCGAC
TGGTACAAGG AACGGCTGAA GGGCAAAAAG GTCTGCCTGT GGCCAGGCGG CTCCAAGCTG
TGGCACTGGG CGCACGCCAT CGAAGAGGAG ATGGGCGTCA AGGTCGTCTC GGTCTACACT
AAGTTCGGCC ACCAGGGCGA CATGGAAAAG GGCATCGCGC GCTGCGGCGA GGATGCGCTG
GCGATCGACG ATCCCAACGA ACTCGAGGGC CTCGAGGCGC TGGAGAAGCT GCAGCCGGAC
ATCATCTTCA CCGGCAAGCG TCCCGGCGAA GTCGCCAAGA AGGTCCGCGT TCCGTACCTC
AACGCCCACG CCTATCACAA CGGCCCATAC AAGGGCTTCG AAGGCTGGGT GCGGTTCGCC
CGCGACATCT ACAACGGCAT CTACTCGCCG ATGCACCAGC TCTCCGGGCT GGACATCAGC
AAGGACGAGA TTCCGGCCGA TCGCGGTTTC GTCACGCAGC GCATGCTGTC CGACGCGAAG
CTGCCGGAAG AGATCGCCAA GTCGGAGACG CTGCGGCGCT ACACCGGCAA GGACGACATC
ATCTCCGACC TGCGCAAGAA GAACGCGCCC TACTTCACCC CGATCGTCAA AGCCGAAGCG
GCCGAGTGA
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| Protein sequence | MPYHEFDCSK CLPERQKHAV TKGAGDNLAT ALPLGYLNTI PGSISERGCA YCGAKHVIGT
PMKDVIHMSH GPVGCTYDTW QTKRYISDNN NFQLKYTFAT DVREKHIVFG AEGLLKQNII
EAFKACPDIK RMTIYQTCAT ALIGDDINAV AAEVMEEMPD VDIFTCNSPG FGGPSQSGGH
HKINIAWIND KVGTVEPEIT SDYVINYVGE YNIQGDQEVM LDYFTRMGIQ VLSTFTGNGT
YDGLRAMHRA HLNVLECARS AEYICNELRV RYGIPRLDID GFGFEPLSQS LRKIGMFFGI
EDRAEAIIAE ETARWKPELD WYKERLKGKK VCLWPGGSKL WHWAHAIEEE MGVKVVSVYT
KFGHQGDMEK GIARCGEDAL AIDDPNELEG LEALEKLQPD IIFTGKRPGE VAKKVRVPYL
NAHAYHNGPY KGFEGWVRFA RDIYNGIYSP MHQLSGLDIS KDEIPADRGF VTQRMLSDAK
LPEEIAKSET LRRYTGKDDI ISDLRKKNAP YFTPIVKAEA AE
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