Gene Rpal_1610 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1610 
SymbolmetN 
ID6409267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1724739 
End bp1725845 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content65% 
IMG OID642711499 
ProductDL-methionine transporter ATP-binding subunit 
Protein accessionYP_001990614 
Protein GI192290009 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGCTC CCTGGCAACC GCCCGCGGGA GAGCGCCCCG CCTTTGTATC GTCGCAGCCG 
ACGACCGGTA TCCTAATCGA CCGCGTCCGC AAAGTGTATC CGGCACGGAA GAGCAGCGCC
GAAGTCGTCG CCCTCGATGA TATCAGCCTG ACCGTGCCGA AAGGCTCGAT CCTTGGTGTG
ATCGGCCGCA GCGGTGCCGG CAAGTCGACG CTGATCCGGC TGATCAACGG CCTCGACAAA
CCGTCGAGCG GCCGCGTCGT CGTCAACGGC GTCGAAATCA CCGCGCTGTC CGAGCGCGAT
TTGCGCACCG CGCGGCGCTC GATCGGCATG GTGTTTCAGC ACTTCAATCT ACTGTCGTCG
CGGACCGCCT TCGGTAACGT CGCGCTGCCG CTTGAGATCG CCGGCACGCC CAAGGCCGAG
ATCGAAAAGC GCGTGCTGCC GCTGCTCGAC ATGGTCGGAC TTGCCGACAA GCGCGACCGC
TATCCGGCGG AGCTGTCCGG CGGCCAGAAG CAGCGCGTCG GCATTGCGCG GGCGCTTGCC
ACCGAACCCT CGGTGCTGCT GTCGGACGAA GCCACGTCGG CGCTCGACCC GGAAACCACC
GATCAGATTC TCGAACTGCT GAAGCAGATC AATCGCGACC TGCATCTCAC CATCCTGTTC
ATCACCCACG AGATGGCGGT GGTGAAGGCG CTGGCCGACC GCGTCGCGGT GATCGAGGGC
GGACGGATCG TCGAAGACGG TGCGACGTTC GATGTGTTCG CCACTCCGCG CCATGAGGTG
ACGCGGCGGT TCGTCTCGTC GGTGACCGGC AGCGGCGCGC CGGACTGGCT CCTGGAAAAG
CTCCAGCCGC AGCAGCCGCC GGGCGGGCAG GCGGTGCTGC GGATCACCTT CAAGGGCAGC
GACGCCAACC AGCCGCTGCT GTCGCGGGTG TCGCGTGATC TCGGCGTCAA TCTTAACATT
CTCTCGGGGC AGGTCGAAAT GATCGCCGGC CATCCGTTCG GCACGCTGAT CGTGTCGCTC
GACGCGGTAC CCGAGGTGCT GCGCCAGGTG ATCGCGCAAT TGTCGGCTGG CAACAATCTG
GTGGAGCAGC TCGGCTATGT CGCCTGA
 
Protein sequence
MNAPWQPPAG ERPAFVSSQP TTGILIDRVR KVYPARKSSA EVVALDDISL TVPKGSILGV 
IGRSGAGKST LIRLINGLDK PSSGRVVVNG VEITALSERD LRTARRSIGM VFQHFNLLSS
RTAFGNVALP LEIAGTPKAE IEKRVLPLLD MVGLADKRDR YPAELSGGQK QRVGIARALA
TEPSVLLSDE ATSALDPETT DQILELLKQI NRDLHLTILF ITHEMAVVKA LADRVAVIEG
GRIVEDGATF DVFATPRHEV TRRFVSSVTG SGAPDWLLEK LQPQQPPGGQ AVLRITFKGS
DANQPLLSRV SRDLGVNLNI LSGQVEMIAG HPFGTLIVSL DAVPEVLRQV IAQLSAGNNL
VEQLGYVA