| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1608 |
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| Symbol | |
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| ID | 6409265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1721464 |
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| End bp | 1723437 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642711497 |
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| Product | cysteine desulfurase, SufS subfamily |
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| Protein accession | YP_001990612 |
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| Protein GI | 192290007 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACGC CTGAGCCGAC CCTGCCGCAT CCCGGCTCGG CGGCTTTGCC GCAAGGCGGA
GCGCTGCCGC ATCCGGCGTC GCTAGAGCAG GCGTCGGCCG CAGCGGTAGG CGCACCGGAT
GTCGCCTCGA TCGCGCGGTT GGCGAATGCG TTCTTCTTGG CGCTGCCGAC CGGGGCGGTT
CCGGAGCCCG GCGCCGCGCT TGGGTCGGCG CCGCTGTTTG TGGCCGAGCC GCTGCACAAT
GCCATCCCCG GCACCCCGGC GCTCTCTCCG TCCTATAAGC CGAACCACAA TCCCGGCGCG
GCCTCACCGA TTCCCACCGT AGGTGCGGCT CGGCCGTCGG GACCGATCTT TGCGCTCGAT
CCCAACCTGG GACCGGAGCC GACCACGGCG GTAAGCTCGC TGCCGCAGGA GCTGAAGGTG
CCGCTCGCGG CTCCGCCTGT GGCTCCGCCG CCTCCGTCCG CGCCGGCGGT GCAGCCCGTG
TTCGCGCGCG ACACCGATCT GGCCGCGCTA CCCGGCCGGC TCGACGAATC CCGTAGCTTC
GTGCCGCGCA CCGCATTGCC GAGCGCGGGG CCGTTCGGCG CGCATGCTGC GGCGACGGCA
GCGCCGCTGT ACTTTCTCGC CGACAATCCG GCCCTGGCCC ATGTGACGCC GGCATCAGCC
GCGCCGCCCC GTGTCGAGAC CTTCGACCTC ACGGGACTGG CGCCGCAGCA TCGCCCCGAC
GTGCACGTGC TCGATCTGTC CGGCGCACGT CCGTTCGACG CCAACGTCTT CAAGCGTGAT
TTCCCGATCC TGCGCGAGAC CATCAACGGT CGTCCGCTAG TATGGCTCGA CAACGGCGCC
ACGACGCAGA AGCCGCAATG CGTGATCGAT CGGCTGGTGC AGTTCTACAC GCACGAGAAC
TCAAACATCC ATCGCGCAGC CCACACGTTG GCGGCGCGTT CGACCGATGC CTATGAGGCC
GCTCGCGACA AGGTGCGCGA CTTCATCAAT GCATCGTCGG TGAAGGACAT CGTCTTCGTC
CGCGGCGCCA CCGAGGCCAT CAACCTCGTG GCGCAGGCCT GGGGTCGGCG CAATGTCGGC
GAGGGCGACG AGATCGTGGT GTCGCATCTC GAGCATCACG CCAATATCGT GCCGTGGCAA
CAGCTCGCCG CCGAGAAAGG CGCGCGCTTG CGCGTCGCGC CGGTCGACGA TCACGGCCAG
ATCCTGCTCG ATGAATACGA GAAGCTGCTC GGGCCGAAGA CGAAGATCGT CGCCTTCACG
CAAGTCTCCA ACGCGCTCGG CACGGTGACG CCGGTCGCCG AGATGACGGC GCTGGCCCAT
CGCCACGGCG CCAAGGTGCT GGTCGACGGA GCCCAAGGCG TCTGCCACAT GCCGGTCGAC
GTCCAGGAGT TGGATGTCGA TTTCTATGCG TTCTCCGGTC ACAAGATGTT CGCGCCGACC
GGGATCGGCG TGCTGTACGG CAAAGCCGAC GTGTTGGAAG CGATGCCGCC TTGGCAGGGC
GGCGGTAACA TGATTGCCGA CGTCACCTTC GAGAAGACGA TCTTCCAGGG GCCGCCGGAT
CGGTTTGAAG CCGGCACCGG AAATATCGCC GATGCAGTCG GTCTTGGGGC CGCGATCGAT
TATTTGAGCC GCATCGGCAT GGCCAACATT GCGGCGCACG AGCACGAGCT GCTTGCCTAT
GGCACCGAGC ACCTGCTGAC GGTGCCGGGC CTGAAGCTGA TCGGTACCGC GCGGGAGAAA
GCCGGCATCC TGTCCTTCGT GCTCGACGGC TGCCGCAGCG AGGATGTCGG CAAGGCGCTC
GATCGCGAAG GCATCGCGGT GCGCGCCGGC CATCATTGCG CCCAGCCGAT CCTGCGCCGG
TTCGGGCTGG AGAGCACGGT GCGGCCGTCG CTCGCCCTCT ACAACACGCA TGATGACATC
GACGCGCTGG TCGACGCGCT GCAGCGTTTG CAGAGCGGGC GGGGCGTCCG ATGA
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| Protein sequence | MSTPEPTLPH PGSAALPQGG ALPHPASLEQ ASAAAVGAPD VASIARLANA FFLALPTGAV
PEPGAALGSA PLFVAEPLHN AIPGTPALSP SYKPNHNPGA ASPIPTVGAA RPSGPIFALD
PNLGPEPTTA VSSLPQELKV PLAAPPVAPP PPSAPAVQPV FARDTDLAAL PGRLDESRSF
VPRTALPSAG PFGAHAAATA APLYFLADNP ALAHVTPASA APPRVETFDL TGLAPQHRPD
VHVLDLSGAR PFDANVFKRD FPILRETING RPLVWLDNGA TTQKPQCVID RLVQFYTHEN
SNIHRAAHTL AARSTDAYEA ARDKVRDFIN ASSVKDIVFV RGATEAINLV AQAWGRRNVG
EGDEIVVSHL EHHANIVPWQ QLAAEKGARL RVAPVDDHGQ ILLDEYEKLL GPKTKIVAFT
QVSNALGTVT PVAEMTALAH RHGAKVLVDG AQGVCHMPVD VQELDVDFYA FSGHKMFAPT
GIGVLYGKAD VLEAMPPWQG GGNMIADVTF EKTIFQGPPD RFEAGTGNIA DAVGLGAAID
YLSRIGMANI AAHEHELLAY GTEHLLTVPG LKLIGTAREK AGILSFVLDG CRSEDVGKAL
DREGIAVRAG HHCAQPILRR FGLESTVRPS LALYNTHDDI DALVDALQRL QSGRGVR
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