Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1595 |
Symbol | |
ID | 6409252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1706111 |
End bp | 1707670 |
Gene Length | 1560 bp |
Protein Length | 519 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642711484 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001990599 |
Protein GI | 192289994 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTTGA CGGCGGGCTT GCGCAAGGCG GCGTCGTTCC GCGCCGACGA CATCGCGCTC GTAACCCCCG AGCGCAGCTT CAGCCATGGC GAGGTACTGG ACCGCGTGGC GCGGCTCGCG CGCGTGTTCC GCCGCTTCGG CATTGAAGCC GGCGAACGGG TTGCGATCCT CGCGGCCAAC GGCAATGCGT ACATTGAGTG CTATTTCGCG GTGCTGTGGG CCGGCGGCGT CGTGGTGCCG ATCAATTCGC GGTTCTCGCT CGCCGAGATG ATCGAGCAGG TGACAGATGC CGAGCCGACG GTGTTGGTGA GCGATCGCAG CTTTCTCGAC AGTGCGCTGC AACTCGCCGA CGCATGTCGT GGCATCACAG CGGTGATAGC TGCCGCGCCG GGTGCCGCAG GGCCGCCTAA GCTCCATGAT TACGAGGCGG TGCTGGCGGA CGAGAAGCCC TGCGCGGATG CGGGGCGCGG CGGCGACGAT CTCGCTTGCC TGTTCTACAC TGGCGGCACC ACTGGCCGGG CCAAGGGCGT GATGCTCAGC CACCGCAATC TGTGGGTCAA CGCGGTGGTC ACGTCGCTGT CTTTCGGCTT CGACGAGACG ACGGTGGCGC TGCACGCTGG GCCGCTGTTC CATCTCGGCG CCGGTGCTCG CGTCTACACC ACCTCGATCA TGGGCGGGCG CCATGTGGTG ATCCCGCGGT TCTCGCCGAA CGACGTGCTG GCTGCGATCA GCCAGCACAA GGTGACGGTA GCGACCTTCG TGCCGACGAT GCTCGGCATG ATCCTGCAGC TGCCGGATCT CGACAGCTAC GATCTGTCGA GCCTGAAGCT GATCACCTAC GGCGCCTCGC CGATGCCGGA AGCCGTGCTG CAGGCGTGTC TGCGGCGGTT TCCGTCGATC AGGTTCGGCC AATCCTACGG CATGACGGAG CTGTCGCCGG TCGCAACCAT TCTGTCACCC GCCGATCATC TGCCGTCCGC GCCGCAGAAT CGGCTGCGCT CGGCCGGTCG GCCCATCGTG TCGGCGGAAG TGAGGATCGT CGATGCCGAG GACCGCGAGC TGAAACCCGG CGAGGTCGGC GAGGTTGTGG TGCGCGGGCC GATGGTGATG ATGGGCTATT GGAAGCAGCC GGAACTGACC GCGCACGTGC TGCGCGGCGG CTGGATGCAC ACCGGCGATT CAGGCCGGTT CGACGCCGAT GGCTATCTCT ACATCTCCGA CCGCATCAAG GACATGATCA TCACCGGCGG CGAGAACGTG TATTCGATCG AGGTCGAGCA CGCGATCGCG GCGCATCCTG ACGTGCTGCA ATGCGCGGTG ATCGGCATCC CGCATGCCAA ATGGGGCGAG GCGGTGCATG CGGTGGTGGT GCGCCGCCCG GGCTCTTCTT TGACGACGGA CGAGCTGATT ACGTTCTGCC GTTCGGTGAT CGCCGACTAC AAATCGCCGC GCAGCATCGA ATTCCGCGAC GACCCGCTGC CGCTGTCGAG CGTCAACAAG ATCAACAAGG CGGCGCTCCG CGCGCCGTAT TGGAGCGACA AGGATCGGCG AGTGAATTGA
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Protein sequence | MQLTAGLRKA ASFRADDIAL VTPERSFSHG EVLDRVARLA RVFRRFGIEA GERVAILAAN GNAYIECYFA VLWAGGVVVP INSRFSLAEM IEQVTDAEPT VLVSDRSFLD SALQLADACR GITAVIAAAP GAAGPPKLHD YEAVLADEKP CADAGRGGDD LACLFYTGGT TGRAKGVMLS HRNLWVNAVV TSLSFGFDET TVALHAGPLF HLGAGARVYT TSIMGGRHVV IPRFSPNDVL AAISQHKVTV ATFVPTMLGM ILQLPDLDSY DLSSLKLITY GASPMPEAVL QACLRRFPSI RFGQSYGMTE LSPVATILSP ADHLPSAPQN RLRSAGRPIV SAEVRIVDAE DRELKPGEVG EVVVRGPMVM MGYWKQPELT AHVLRGGWMH TGDSGRFDAD GYLYISDRIK DMIITGGENV YSIEVEHAIA AHPDVLQCAV IGIPHAKWGE AVHAVVVRRP GSSLTTDELI TFCRSVIADY KSPRSIEFRD DPLPLSSVNK INKAALRAPY WSDKDRRVN
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