Gene Rpal_1593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1593 
Symbol 
ID6409250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp1703755 
End bp1704825 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content62% 
IMG OID642711482 
ProductABC transporter periplasmic binding protein, urea carboxylase region 
Protein accessionYP_001990597 
Protein GI192289992 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR03427] ABC transporter periplasmic binding protein, urea carboxylase region 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.61246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGAAGA CTCGTTTCCT ATCTTCTCTG ATCCTTGCTG GCTCGATCGT CGCCCTGAGC 
GTCGCCGGAG CCTCCGCCGC CCCCAAGAAA GACTTCAAGG TCGCCTGGTC GATCTATGTC 
GGCTGGATGC CCTGGGGCTA TGCCGCCGAC ACCGGCATCG TGAAGAAGTG GGCGGACAAA 
TACGGCATCA CCATTGAGGT GAAGCAGTTC AACGACTACG TCGAGTCGAT CAATCAATAC 
ACCGCGGGCT CCTATGACGC GGTGACCATC ACCAACATGG ATGCTCTGTC GATTCCCGCC 
GCCGGCGGCG TCGACACCAC CGCGGTGATC GTCGGCGACT TCTCCAACGG CAACGACGCG 
GTGATCCTGA AGGACAAGAA GGATTTCGCC GCGATCAAGG GCCAGAAGGT CAATCTGGTC 
GAGTTCTCGG TGTCGCACTA TCTGCTGGCG CGCGCGCTCG AATCCAACAA GCTGAGCGAG 
AAGGACGTCA AGGTGGTCAA CACCTCCGAC GCCGACCTCG CCGCCGCCTA CAAGACGGCC 
GACGTCACCG CGGTGGTGAC CTGGAATCCG ATCGTCTCTG AAATCCTCGC CTCGCCCGAC 
GCCCACAAGG TGTTCGACTC CTCGCAGATC CCCGGCGAAA TCATGGATCT GATGGTCGCC 
AACACCGCGG TGGTGAAGGA CAATCCGAAC TTCGCCAAGG CGCTGGTCGG GATCTGGTAC 
GAGACCATGG CGAAGATGAC GGCGGAAGGC GCCGACGCAA AGGCCGCCAA GGAAGCGATG 
GCGAAGGCGT CCGGCACCGA TCTGGCCGGC TTCGAAAGCC AGCTCGCCTC GACCAAGCTG 
TTCAGCAAGG CCGCCGACGC CGAAGCCTTC ACCAAGAGCG CTGCGATCGG CAGCACCATG 
GACCGCGTCC GCAAGTTCCT GTTCGACAAG GATCTGCTCG GCAAGGGTGC GAAGTCGGCC 
GACGCCGTCG GCATCGAGCT CGCGGACAAG AGCGTACTCG GCGACAAGGC CAACGTGAAG 
CTGCGGTTCG ACCCGAGCTT CATGAACGCC GCCGCGGCCG GCAAGCTGTA A
 
Protein sequence
MRKTRFLSSL ILAGSIVALS VAGASAAPKK DFKVAWSIYV GWMPWGYAAD TGIVKKWADK 
YGITIEVKQF NDYVESINQY TAGSYDAVTI TNMDALSIPA AGGVDTTAVI VGDFSNGNDA 
VILKDKKDFA AIKGQKVNLV EFSVSHYLLA RALESNKLSE KDVKVVNTSD ADLAAAYKTA 
DVTAVVTWNP IVSEILASPD AHKVFDSSQI PGEIMDLMVA NTAVVKDNPN FAKALVGIWY 
ETMAKMTAEG ADAKAAKEAM AKASGTDLAG FESQLASTKL FSKAADAEAF TKSAAIGSTM 
DRVRKFLFDK DLLGKGAKSA DAVGIELADK SVLGDKANVK LRFDPSFMNA AAAGKL