Gene Rpal_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1589 
Symbol 
ID6409246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp1700599 
End bp1701234 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content64% 
IMG OID642711478 
Producturea carboxylase-associated protein 1 
Protein accessionYP_001990593 
Protein GI192289988 
COG category[S] Function unknown 
COG ID[COG3665] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03424] urea carboxylase-associated protein 1 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.138345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACGA TTCCCGCTTC CGCCCGCATC GTGCTTGACA CCGAGATCCC GGCGCGCGTG 
CCGTGGTCGG CGACCATCCG CAAGGGGCAG ACGCTGCGCA TCGTCGACAG CCACGGCCAG 
CAGGCGGTCG ACACCCTGTT CTACGCCGCC AGTGATCATG GCGAACGCTA CAGCGGCCAG 
GACACGCTGC GCGCGCAAGG CTCGGCCTAC GTCACCACCG GCACCCGGAT CATGTCGACC 
GAAGGCCGCA CCATGCTGCG GATGGTGGCC GACAGCTGCG GGTTGCACGA CACCTCTGCT 
GGCGCGTGCT CCTGTGAGAG CAACACCGTG CGGTTCGGGC ATCAGACCAA GTATCTGCAC 
GCCTGCCGCG AAAACTTCGT GCTGGAGGCC GCCAAGCACG GCCTGTCGAA GCGCGACATC 
GTGCCGAATC TGAACTTCTT CATGAACGTG CCACTCGATC CCGACGGCAA TTTCACCGTG 
GTCGACGGCG TCTCCAAGCC CGGCGACTAC GTCGAGATGG TCGCCGAGAT GGACGTGCTG 
TGCCTGATCT CGAACTGTCC GCAGGTCAAC AATCCCTGCA ACGGCTTCTT CCCGACGCCG 
ATCCAGGTGG TGATCTACGA GGCCAGCGAG GACTGA
 
Protein sequence
MTTIPASARI VLDTEIPARV PWSATIRKGQ TLRIVDSHGQ QAVDTLFYAA SDHGERYSGQ 
DTLRAQGSAY VTTGTRIMST EGRTMLRMVA DSCGLHDTSA GACSCESNTV RFGHQTKYLH 
ACRENFVLEA AKHGLSKRDI VPNLNFFMNV PLDPDGNFTV VDGVSKPGDY VEMVAEMDVL 
CLISNCPQVN NPCNGFFPTP IQVVIYEASE D