| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1585 |
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| Symbol | |
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| ID | 6409242 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1692141 |
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| End bp | 1693703 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642711474 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001990589 |
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| Protein GI | 192289984 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.459173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATC TCGAAGCAGT GTCACGGTTG CGGCGGCTGG CAGATGTGCG GACGCTATGG
CGCGCGGAAT TCCCGAAGCG TATCGCGCTG TCGCAGGGTG ATGCCCGTGT CAGTTACGGC
GAACTCGCTG ATCAAATCGA CGCAACCGCG GCTTGGTTCT ACGAACTCGG GTACCGTGCG
GGCGAACGGA TCATCCTGGT CGGGGAGAAC TCGGCAGCGC TGCTCGAGGC GATGTTCGCG
GCGAGCGCGC TGGATCTATG GGTTGTGATG TTGAATGCCC GGCTATCCAA GCCGGAGATC
GATGCGATCC GGGCGCATTG CCGCCCGCGC GCGACGATCT ATTTCGCCGA TCGGTCCCCG
GATGCTCTGC AGCACGGTGA GGTCAGCGCT GCGCGCCGCG TCGTTCATCC CAGCCTCGGC
ACGGTTCTGA TCGACGAGGA AGACCTTGGC GGCACGGCCG AGCCGGTGCT AGACGATCCC
GCCGAACAGA TCGCCTTGCT AATGTATACG TCGGGTTCAA CCGGCACGCC GAAGGGCGTC
ATGCTGTCCC ATCGCAGCGT GCTGACTTTA GCCTCGACCT CGGCATCGCT GCGGCAGTTG
CGCACTGAGG ATCGCCTGTT CCTGACGACA CCGATGACCC ATGTGATGGG ACTGTTCTCC
GTCAGCCTGT CGGCGCTGCT GGTCGGCGCC ACGGTGGTGA TCGAGCAGCG GTTCGATCCG
GAGACCGTCC TGAACGTGCT GAAGCGCGAG CGGATCACGG TGTTTCCGGC AGTCCCGACG
GTATTCTACA AGCTGCTGCA TCACATCGAA ACGCACAACG TTCGACTCGA TCTTCCTTCG
CTGCGCTTTA TCTGGGCCGG TGGCTCGCTG TTGGAAGCCG CGTTGGCAGA GCGCACGCGT
GCGGTGTTCG GGCTTCCGCT TCACAATGGT TACGGCATGA CCGAGGCTTC GTCGTCGATC
TGCCTGACGT CGGTGACTGC GCCGGCTGTG CCGGAGTCGG TCGGCTGGTT TCTGCCGGGC
CTCGAGTGGA AGCTCGTTGC CGTTCGCTCG GGCGATGCGG CCGATAGCGA TACGCCCGAC
GTCGGCGAAT TGTTGATCCG CGGGCCGACC GTTATGAAGG GCTATTTTCG TGATCTCGAA
CTCACCGCAC GCACGCTGGA TGCGGACGGC TGGCTGACGA CAGGCGATCT CGCTCGGGTC
GCCGATGGCC AAGTCTACAT TGTCGGGCGC AGCAAGGACA TGATCGTGCG CTCCGGCTTC
AACGTGTATC CCGCGGAGGT CGAGCGCGCC ATTAACGCTC ACCCCGAGGT CGTCCACTCC
GCTGTGGTCG GCAGGCGTGA GCAGAACAAT GAGCGCATCA TCGCCTTCGT CGAGCGAGCG
CCGGCCTCAT CCGTCAGCGA CACGGAGCTT GACGCGTTTC TTGCGGGCCG GCTTGCCGGC
TACAAGCGCC CCCAGGAATT CCGCTTCGTG GACAAGCTGC CGCTGGCGAC CAATGGCAAG
GTTCTGAAGC ACAGACTGGC GCTGCATGCG TCCGATGGCG CTCCTGTCTC CGAGACGGCT
TGA
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| Protein sequence | MTDLEAVSRL RRLADVRTLW RAEFPKRIAL SQGDARVSYG ELADQIDATA AWFYELGYRA
GERIILVGEN SAALLEAMFA ASALDLWVVM LNARLSKPEI DAIRAHCRPR ATIYFADRSP
DALQHGEVSA ARRVVHPSLG TVLIDEEDLG GTAEPVLDDP AEQIALLMYT SGSTGTPKGV
MLSHRSVLTL ASTSASLRQL RTEDRLFLTT PMTHVMGLFS VSLSALLVGA TVVIEQRFDP
ETVLNVLKRE RITVFPAVPT VFYKLLHHIE THNVRLDLPS LRFIWAGGSL LEAALAERTR
AVFGLPLHNG YGMTEASSSI CLTSVTAPAV PESVGWFLPG LEWKLVAVRS GDAADSDTPD
VGELLIRGPT VMKGYFRDLE LTARTLDADG WLTTGDLARV ADGQVYIVGR SKDMIVRSGF
NVYPAEVERA INAHPEVVHS AVVGRREQNN ERIIAFVERA PASSVSDTEL DAFLAGRLAG
YKRPQEFRFV DKLPLATNGK VLKHRLALHA SDGAPVSETA
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