| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1578 |
|---|
| Symbol | |
|---|
| ID | 6409235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 1687172 |
|---|
| End bp | 1687513 |
|---|
| Gene Length | 342 bp |
|---|
| Protein Length | 113 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642711470 |
|---|
| Product | cytochrome c, class I |
|---|
| Protein accession | YP_001990585 |
|---|
| Protein GI | 192289980 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2863] Cytochrome c553 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTCA CACGTTCATC GGTTGTTTCA TTAGTTCTTG CCGCCGCCAC GCTGGCGGTG
GCAGCCACTC CCTCACTCGC AGAGGTGCAC AAAAAGAAAA AGACCGCTCT CCCGCCGCCA
CTGATCGTGC AGGCCTGCTC GGGCTGCCAC GGCCAGTTCG GCAAGGGCCA GGGCGGAACG
CCCGAACTCG CCGGCTACAA ACGCGACTCC TTCGTTCTGG TCTGGGACGA GTTTCGCAAC
AACCAGCGGC CAGCCGCGAC CATCATGCCG CGCATCGCGC GCGGCTACTC CGAAGCCGAG
GTCGCCACTT TGGCCGACTA TTTCTCATCC TTGCCGCGCT GA
|
|---|
| Protein sequence | MSVTRSSVVS LVLAAATLAV AATPSLAEVH KKKKTALPPP LIVQACSGCH GQFGKGQGGT
PELAGYKRDS FVLVWDEFRN NQRPAATIMP RIARGYSEAE VATLADYFSS LPR
|
|---|
| |