| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1574 |
|---|
| Symbol | |
|---|
| ID | 6409231 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1683348 |
|---|
| End bp | 1685012 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642711466 |
|---|
| Product | sulfatase |
|---|
| Protein accession | YP_001990581 |
|---|
| Protein GI | 192289976 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3119] Arylsulfatase A and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCA AGCGCAACGT GCTGTTCATC ATGTGCGACC AGCTGCGATA CGACTACCTA
GGCATATCTG GTCATCCGCG ATTGAAGACC CCGAACATCG ATGCACTGGC GCGACGCGGC
GTCCGCTTCT TCAATGCCTA TGTGCAGTCG ACGATCTGCG GCCCGTCCCG GATGAGCACC
TATACCGGCC GTTATGTGCG GTCCCATGGT TCGACCTGGA ACGGCATCCC GCTGCGGGTC
GGTGAACCGA CCCTGGGTGA TCATCTCAAA GAGATCGGCG TCCGTAACGT CCTGGTCGGC
AAGACCCACA TGGTGCCGGA TCGCGAGGGC ATGGCGCGGC TCGGCATCGT GCCGGATTCG
CTGATCGGCG TTCACGTCTC GCAATGCGGC TTCGAGCCGT ACGAGCGCGA CGACGGTCTG
CATCCGGACG GTCCATACGA TCCGGCGCCG GACTACGACG CCTATCTGCG CAGCCAGGGC
TTCGACGCCG GCAACCCGTG GGAGGCGTGG GCGAATTCCG CCGAGGGCGG CGACGGCGAA
CTGCTCAGCG GCTGGCTGCT CTCGCATGCC GACAAGCCGG CGCGCGTCCC CGATGAACAT
TCGGAAACGC CCTATATCAC CCGCCGGGCG ATCGAGTTCA TCGGCGAGGC GGAAGCCGAT
GGGCGGCCAT GGTGTTTGCA CCTGTCATAC ATCAAGCCGC ACTGGCCCTA TATCGTGCCG
GCGCCGTATC ACGATCGCTA CGGTGCAGAC GACGTCCTGC CGGTGGTGCG GTCCGATCGT
GAGCGGCAGC ACCCGCATCC GATCTTCGCC GAGTTTCAGC ACGAGCGCGT GTCCCAGGCG
TTCTCGCGGC CGGGCGTACG TGAACGGGTA ATCCCGGCCT ATATGGGGTT GATCGAACAG
ATCGACGACC AACTCGGGCT GCTGTTCGCC TATCTCGACG AACGCGGACT GACCGACGAC
ACCCTGATCG TGTTCACCTC CGATCACGGC GATTATCTCG GCGACCACTG GCTCGGCGAG
AAGCAGATGT TTCACGACGT CTCGGTGAAG GTACCGTTGA TCGTGGTCGA TCCGTCGCCT
GCAGCCGACG CTACGCGCGG CACGGTTTCG GAGGCGCTGG TCGAGCAGAT CGATCTGGCG
CCGACCTTCC TCGATTACTT CGGCGGCCGG CCCAAGCCGC ACATTCTCGA GGGACGGTCG
CTGCTGCCGC TGCTGCGCTG CGAGCGCGTC GAAAACTGGC GATCCTACGT CTTCTCGGAA
TACGACTACG CACTGGATCG CGCTCGCATC TCGCTCGGAA CGCCGGTGCC TGATTGTCGG
CTGACGATGG TGGCCGATGG TCGCTGGAAG GCGGTGTTCG TCGAGGGATT CCGCCCGATG
CTGTTCGACG TCGACAATGA TCCGCACGAA TTCGACGATC TTGGTGACAG CGAAGATCAT
GCCGAGGTCC GGCAGCGCCT GTCCGATGCG TTCTTCGCCT GGGCACGGCG GCCGCGCAGC
CGAATCACTC GCTCGGACGA TGCAATTGCC GCGAAGGATG AGGCGCAGCG TGCCTACGAT
CGCAATATCG AATCCGGCGT CCTGATCGGC TATTGGGACG AGACGGAGCT CGCCGAGGAA
CGCGCCAAGC GCGCCCGATA TCTGGCATTG CGCCGACCAG ACTGA
|
|---|
| Protein sequence | MTTKRNVLFI MCDQLRYDYL GISGHPRLKT PNIDALARRG VRFFNAYVQS TICGPSRMST
YTGRYVRSHG STWNGIPLRV GEPTLGDHLK EIGVRNVLVG KTHMVPDREG MARLGIVPDS
LIGVHVSQCG FEPYERDDGL HPDGPYDPAP DYDAYLRSQG FDAGNPWEAW ANSAEGGDGE
LLSGWLLSHA DKPARVPDEH SETPYITRRA IEFIGEAEAD GRPWCLHLSY IKPHWPYIVP
APYHDRYGAD DVLPVVRSDR ERQHPHPIFA EFQHERVSQA FSRPGVRERV IPAYMGLIEQ
IDDQLGLLFA YLDERGLTDD TLIVFTSDHG DYLGDHWLGE KQMFHDVSVK VPLIVVDPSP
AADATRGTVS EALVEQIDLA PTFLDYFGGR PKPHILEGRS LLPLLRCERV ENWRSYVFSE
YDYALDRARI SLGTPVPDCR LTMVADGRWK AVFVEGFRPM LFDVDNDPHE FDDLGDSEDH
AEVRQRLSDA FFAWARRPRS RITRSDDAIA AKDEAQRAYD RNIESGVLIG YWDETELAEE
RAKRARYLAL RRPD
|
|---|
| |