Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1567 |
Symbol | |
ID | 6409224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1675391 |
End bp | 1676320 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642711460 |
Product | Integrase catalytic region |
Protein accession | YP_001990575 |
Protein GI | 192289970 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGCCCG CGGCCAAGCG GAAAGCTGTC GCGCATCTGC AAACTGCATT CGAGATGAGC GAACGGCGGG CGTGTAAAGC CATCGGCTGC TGCCGCATGA CAGTCAGATA TCAGACGAGC CGGAGCGATG ATGCCGGGCT GCGCCAACGT ATGAGGGCGA TCGCCCATGA GCGCCGGCGC TTTGGCTATC GGCGCCTCCA CGTCCTGCTC AAGCGTGAGG GCTACCTGGT CAATCACAAG AAGCTGTTCC GGCTGTACCG TGAGGAGAAG CTCACAGTGC GCCGCGGGGG TGGCCGCAAA CGGGCCCTCG GCACACGAGC TCCCATGACA GTGCCGGTGC TCCCGAATGA TCGCTGGTCG CTCGACTTCG TGTCGGATCA GATGACCGAT GGTCGACGCT TCCGCATTCT GACTGTGGTC GACGACTGCA CCCGCGAGTG CCTGGCGCTG GTGGTCGACA CCTCGCTCTC GGGCGCCCGG GTCGCACGAG AACTGGACCG GCTGGTTGCC GAGAGCGGCA AGCCCAAGAT GGTGGTGAGC GACAATGGCA GCGATTTCAC CAGCAATGCC ATCCTGACAT GGGCCGATCA GAGCCGTATC GCCTGGCACT ACATTGTGCC GGGAAACCCC ATGCAAAACG CCTTCATCGA GAGCTTCAAC GGCCGCCTGC GGGATGAACT GCTGAACGAA ACGCTGTTCA CCTCGCTGGC CCAGGCCCGC GTAGCGCTCC GGTGCTGGCG GGCCGACTAC AATGATGCAC GACCGCACTC ACAGCTCGGG TGGCGGACGC CATCCGAGTT CGCCGCCACC TGCAATCCGC GTCGGGATCT GGCGCTGCGA AGCTACCTTG TGGGAGGTCG ACCGTCTCTT CATACCTTAA CAGTCTGTTG CTTCGCAGCG AGGTGTTCTC AGCAACGGTG GCCCCTTTAA
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Protein sequence | MTPAAKRKAV AHLQTAFEMS ERRACKAIGC CRMTVRYQTS RSDDAGLRQR MRAIAHERRR FGYRRLHVLL KREGYLVNHK KLFRLYREEK LTVRRGGGRK RALGTRAPMT VPVLPNDRWS LDFVSDQMTD GRRFRILTVV DDCTRECLAL VVDTSLSGAR VARELDRLVA ESGKPKMVVS DNGSDFTSNA ILTWADQSRI AWHYIVPGNP MQNAFIESFN GRLRDELLNE TLFTSLAQAR VALRCWRADY NDARPHSQLG WRTPSEFAAT CNPRRDLALR SYLVGGRPSL HTLTVCCFAA RCSQQRWPL
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