| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1565 |
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| Symbol | |
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| ID | 6409222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1669157 |
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| End bp | 1669957 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642711458 |
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| Product | transcriptional regulator, DeoR family |
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| Protein accession | YP_001990573 |
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| Protein GI | 192289968 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.333712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAC AAGATGCTCC CTTGAACGCA GTGACCGGAT CTTCGCGCCA ATCGGCGATC
GCCGAGATGT TGCGCAGCCG GGATTTCATT TCCGTCGACG AGTTGGCGGC GCGCTTCTCC
GTCGCCACCC AGACGATCCG CCGCGATCTC GTCGCGCTGT GCGATCAGGG GCTGGCGCGT
CGGCGGCACG GCGGCATCGA AAGCGTGGCG AGAAGTGGAA ACCTGACATT CAAGGATCGC
CGCGTGCTGA ACCGCGAAGC CAAGCAGAGC ATTGCTGCCG CGGTGGTCCG CTATGTGAAC
GACGGCGATT CCCTGTCGCT CGGGATCGGC ACTACGTCGC AGTTCGTCGC CGAGGCGCTG
CTTTCGCATC GCCGTCTGAA GATCGTCACC AACAATCTGC CGCTCGCGCT GATGGTCGGG
CAGAACTCGG ACTTCACGCT GGCGATCGCC GGCGGCACGG TGCGTGGCGG CGACCTTGAT
GTTTGCGGCC CCTCGGTCGA CAGCTTCTTT GCCGCCTACA AGGTCGATAT CGCGATCCTC
GGCGTCGGCG GCATCGACGC GGACGGCTCA CTGCTCGATT TTTCGGAGGA GGAAGTTCGT
TTGCGCGAGG CGATGCTGCG CAACTGCCGA CGCTCCTATC TCGTGCTGGA TTCTTCGAAG
TTCATGCGTC CCGCCCACGT TCACGGCGGC CGCATCGACC AGGTCAACGC CGTCTTTTGC
GAAGCGGATC CGCCCCCCGA AATCCGGCGC ATCCTGGATC AATCCGGCGT TCAGTTCGTC
AGGAGCTCGC TGACGGGCTG A
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| Protein sequence | MNEQDAPLNA VTGSSRQSAI AEMLRSRDFI SVDELAARFS VATQTIRRDL VALCDQGLAR
RRHGGIESVA RSGNLTFKDR RVLNREAKQS IAAAVVRYVN DGDSLSLGIG TTSQFVAEAL
LSHRRLKIVT NNLPLALMVG QNSDFTLAIA GGTVRGGDLD VCGPSVDSFF AAYKVDIAIL
GVGGIDADGS LLDFSEEEVR LREAMLRNCR RSYLVLDSSK FMRPAHVHGG RIDQVNAVFC
EADPPPEIRR ILDQSGVQFV RSSLTG
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