Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1550 |
Symbol | |
ID | 6409207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1642044 |
End bp | 1643195 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642711444 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001990559 |
Protein GI | 192289954 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGGCC TGAAGTTCGG CCCGCTCGCG GGCGTTCGCG TGCTCGACAT GTCGCGGCTG GCGCCGGGGC CGTACGCGAC GATGCTGCTG GGCGACCTCG GCGCCGACGT CATCGTCGTC ACCGGCGGCC GCGGCGGCGC GCCGGCGGAA TGTTTCGCCC GCGGCAAGCG CTTCGTCGCG CTCGATCTGA AGGCCGCTGA GGGCCGTACC GCCTTACACA AGCTCGCGGC CGAAGCCGAC GTGTTCGTCG AGAGCTTCCG TCCCGGCGTC GCCGACCGGC TCGGCGCGGG CTACGCCGAG CTGTCGTCGC TCAATCCGCG GCTGGTCTAT TGCGCGCTCA CCGGCTACGG CCAGGACGGG CCTCTGGCGC AGGAGGCCGG CCACGACCTC AACTATCTGG CGGTCACCGG CGTGCTCGGC GCGATCGGGC CGCACGATCG TCCGCCGACC GCGCCGCTCA ACCTGATCGC CGACTTCGCC AGCGGTAGCT TCAATGCCGT GATCGGCGTG CTCGCTGCGC TGTACGAGCG CGAGCGCTCG GGCAAAGGGC AATTCGTTGA CGCGGCGATG ATTGACGGCT GCATGTCGCT GATGGGGATG TTCGCCTCGG TGTGGGGGCA GGACGTGCTG CCGTCGCGCG GCCGCGGCTG GATCAGCGGC GAGGCGCCAT ACTATCGCTG CTACGAATGC GCGGACGGCA GGTACATCGC CATCGGCGCA CTGGAGCCGC AGTTCTTCGC GGCGCTATGG GCCGACCTCG GCGGCGGGGC CCCGCCGGAT CAGTTCGACC TCACACAGTG GCCGGCGATC GAGCAGCGGT TCGCGGACAC GTTCCGCACG GCGCCGCGCG ACCATTGGGC GGCGCGTTAC GCCGGACGCG ACGTTTGCGT GTCGCCGGTG CTGAGCCCCG ACGAAGTGTG GGCGCAGCCG CACATCAAGC ATCGATTCCC GGACGCCTCA CCGGACGTGG CGCCGTCGTT TCCGCGGTTC GGCCGTACCG AGATCGCGCC GTCGCCGTGC GACCAGCGCG ATCAGTCGGA CGCGATCCTC GCCGGGGCGG GGGTCACCGC CGCCGACATT GCCCGCGCCA GCCCGGAGGC CGAACGCCGC CGCAAGGGCT GGAGCGAGTG GCCGCCCGTT TTCAAACACT GA
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Protein sequence | MSGLKFGPLA GVRVLDMSRL APGPYATMLL GDLGADVIVV TGGRGGAPAE CFARGKRFVA LDLKAAEGRT ALHKLAAEAD VFVESFRPGV ADRLGAGYAE LSSLNPRLVY CALTGYGQDG PLAQEAGHDL NYLAVTGVLG AIGPHDRPPT APLNLIADFA SGSFNAVIGV LAALYERERS GKGQFVDAAM IDGCMSLMGM FASVWGQDVL PSRGRGWISG EAPYYRCYEC ADGRYIAIGA LEPQFFAALW ADLGGGAPPD QFDLTQWPAI EQRFADTFRT APRDHWAARY AGRDVCVSPV LSPDEVWAQP HIKHRFPDAS PDVAPSFPRF GRTEIAPSPC DQRDQSDAIL AGAGVTAADI ARASPEAERR RKGWSEWPPV FKH
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