| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1548 |
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| Symbol | |
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| ID | 6409205 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1638465 |
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| End bp | 1639958 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711442 |
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| Product | malate:quinone oxidoreductase |
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| Protein accession | YP_001990557 |
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| Protein GI | 192289952 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0579] Predicted dehydrogenase |
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| TIGRFAM ID | [TIGR01320] malate:quinone-oxidoreductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.307133 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCAGA TCCCCGAGAC CTCCGACATC GTACTGATCG GCGCCGGCAT CATGAGCGCG
ACGCTCGGCA CCGTCTTGAA AGAATTGGAG CCGTCGCTCT CCGTGACGAT GTTCGAGACG
CTGCACGATT GCGGCCAGGA AAGCTCGCAG GCCTGGAACA ACGCCGGCAC CGGCCACGCC
GCCAATTGCG AGCTCAACTA CACACCGCAG CGGTCGGACG GCAGCGTCGA CATTTCCAAG
GCGCTCGAGG TCAACACCGA GTTCGACATC TCGCGGCAGC TCTGGGCGCA TCTCGTCGGC
AAGGGCGCGA TTCCGGACCC ACGCGCCTTC CTGCATCCGT GTCCGCATAT GAGCTTCGTC
TGGGGCGACG ACAATGTTGC TTTCCTGCGC CAGCGTCATC GGGAGATGGC GGCGCATCAT
TGCTATCACG GCATGGAGTT CAGCGAGGAC CCGGCCCAGA TCGCCGCCTG GGCGCCGCTG
ATCATCGAAG GCCGCGAGCC GGGGCAGCCG ATCGCCGCGA CGCGGATCAT CAGCGGCGCC
GATGTCGATT ACGGCGCGCT GACGCATCTG CTGGTGAAAC AACTGCAGGC GCAGTCCGGC
TTCTCGGTGC ACTACAAGCA TCGAGTCGTC GCGCTGGCGC GTGGCGCCGA CGGGCGTTGG
CTGGTGACGG TCGAGAACGT TACGACTTAC GAGCGGAGCA CGACCTCCGC TCGCTTCGTC
TTCGCCGGTG CCGGCGGCGG CTCGCTCGAC ATCCTGCAGA AGTCCGGGAT TCCGGAAGGG
AACGGCTATG CGGGCTTTCC GGTCAGCGGC ATCTGGCTGC GCTGCGATGT CGACGACATC
AGCGCGCGGC ATCACGCCAA GGTCTATGGC AAGGCCGCGC ACGGCTCGCC GCCGATGTCG
GTGCCGCATC TCGACACCCG GATCATCGGC GGCAAGCGCT CGCTGCTGTT CGGGCCTTAT
GCGGGCTTCT CCAGCAAATT TCTGAAGCAC GGCTCTTACG CGGATCTGTT GCGATCGATC
GAGCCCGGCA ACATCCTGCC GATGCTGGCG GTGGCGCGTG ATGACTGGCA GCTCAGCGAA
TATCTGATCG GCCAGGTGCT GCAGACCTCG GAACATCAGT TCGCCGCGCT GCAAGGCTTC
TTCCCGCGGG CGCAGCGCGA GGACTGGCAG CGCGCGGTCG CTGGCCAACG GGTGCAGATC
ATCAAGCCCG ACCCCCAGCA CACCGGTGTG CTGGAATTCG GCACCGAGCT GCTCGCCAGT
GCCGACAAGT CCTTTGTCGC GCTGCTCGGC GCGTCGCCGG GCGCCTCGAC CGCCGCCTTC
ATCGCCATGG AGGTGCTGCA GAAATGCTTC GACGACCGGC TGACGCCAGA TGCCTGGCTC
GGCCGCTTGA AGCAGATGAT TCCGACCTAT GGCATTGACC TTAAGAAGGA CGCCGACGCC
TGCCGCGACA GCCGCGCCAA AACCGCTAAA GTCCTGCAGC TCGATTTCGT CTAG
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| Protein sequence | MSQIPETSDI VLIGAGIMSA TLGTVLKELE PSLSVTMFET LHDCGQESSQ AWNNAGTGHA
ANCELNYTPQ RSDGSVDISK ALEVNTEFDI SRQLWAHLVG KGAIPDPRAF LHPCPHMSFV
WGDDNVAFLR QRHREMAAHH CYHGMEFSED PAQIAAWAPL IIEGREPGQP IAATRIISGA
DVDYGALTHL LVKQLQAQSG FSVHYKHRVV ALARGADGRW LVTVENVTTY ERSTTSARFV
FAGAGGGSLD ILQKSGIPEG NGYAGFPVSG IWLRCDVDDI SARHHAKVYG KAAHGSPPMS
VPHLDTRIIG GKRSLLFGPY AGFSSKFLKH GSYADLLRSI EPGNILPMLA VARDDWQLSE
YLIGQVLQTS EHQFAALQGF FPRAQREDWQ RAVAGQRVQI IKPDPQHTGV LEFGTELLAS
ADKSFVALLG ASPGASTAAF IAMEVLQKCF DDRLTPDAWL GRLKQMIPTY GIDLKKDADA
CRDSRAKTAK VLQLDFV
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