| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1546 |
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| Symbol | |
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| ID | 6409203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1636790 |
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| End bp | 1638070 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 642711440 |
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| Product | protein of unknown function DUF1212 |
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| Protein accession | YP_001990555 |
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| Protein GI | 192289950 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2966] Uncharacterized conserved protein
[COG3610] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCGCG AGCCGATCCC GGCGCAGCAG GCCGCGCATG TCGCGCTGCG GCTTGGCCGG
CTGATGCTGG CCAACGGCGC CGACACCGCG CATGTGGTGA GCGCCGTCGC CGGCTTCGCC
GAACGACTCG GCTATCGAGT CCGCCTGTTC GTCGGCCTCG AAGGGCTGAT CCTGACGCTC
GAAGACGACG AAGGCTTTCG TACCCGGCTC GGCCCGGCGA TCGCCGGCAC CGCCGTCAAC
ATGGGCGTGC TCAGTGCGCT CGGCGAGTTG CGCAGCCGCA CCATCGCCGA CGTGGACGAT
CTCGCGGCGA TCGACCGTGC GCTCGACGAC ATCGAGCACG GCCCCGCCAA CTATCCGCGC
TGGCTGGTGG CGCTCGGCAT GGGCGTCACC GCCGCCTCGT TGGCCCGGCT GTTCGGCGCG
GCGTGGCCGG TGGTCGGCGT CTCGGTGCTG GTCGGTGTCG TCACGCAGGG ACTGCGTCAG
TCTCTCGCGG CGACCGCGAC CAATCCGGTC GCCGGCGCTG GGCTCGCGGC GTTCGGCGGC
GCGCTGGTCG GGCTGCTGGC GATGCGGGCG TTTCCCGGAC TGTCGCCGAC GCTGTGTCTG
GTCGCCGCCG GCATGATCCT GGTGCCCGGC GTGCCGCTGC TCAACGGCGT GCGCGACACC
CTCGGCAGCC ATGTCGGCAC CGGGCTCGGC CGGCTGATGC TGGCGGCCGT CACGGTGCTG
GCGATCACGC TGGGGCTGTT CGCGTCGGCC AGCCTGATGG GTGACGCGCT GCCAGTGAGC
GGCGCTCCGC CGCTGCTCGC AACGTCGGAA GACCTGGCGT TCTCGGCGCT CGCCGGCGCT
GGCTACGCGC TGCTGTTCAA CGTGCCGGCG CGCGCCGCAT GGGTCTGCGT GATCTGCGGC
ATGGCCGGCC ACGGGCTACG CACCGGGCTC GAACATCTCG GCCTCGAACT CAGCCTCGCC
TGCTTGATCG GCGCGTTCGT CGCTGCGGTG CTCGGGCGGA TATTCGCGGG CCGCTTCCGT
GTCCCGGCCG TCACCTTTGC GTTTCCCGGC ATCGTCGCAA TGATCCCTGG CTCCTACGCG
TTTCGCGCCG GCATCGGCGG GCTTGCCATC ATGAAGGCCG GCGCCGCTGC GTCGCCAATT
CTCATCGCCG AAACCCTCGG CCTGATCGTC ACCGTCGTCG TGGTGACGGC GGCGTTGGGT
GTCGGCCTAT GCCTGGCGCT GGCCGCGCCA CTGCCGGCCG CTCTGGGAGG CCCATCGAAC
CAGGAAGGAG TGCCCCGATG A
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| Protein sequence | MLREPIPAQQ AAHVALRLGR LMLANGADTA HVVSAVAGFA ERLGYRVRLF VGLEGLILTL
EDDEGFRTRL GPAIAGTAVN MGVLSALGEL RSRTIADVDD LAAIDRALDD IEHGPANYPR
WLVALGMGVT AASLARLFGA AWPVVGVSVL VGVVTQGLRQ SLAATATNPV AGAGLAAFGG
ALVGLLAMRA FPGLSPTLCL VAAGMILVPG VPLLNGVRDT LGSHVGTGLG RLMLAAVTVL
AITLGLFASA SLMGDALPVS GAPPLLATSE DLAFSALAGA GYALLFNVPA RAAWVCVICG
MAGHGLRTGL EHLGLELSLA CLIGAFVAAV LGRIFAGRFR VPAVTFAFPG IVAMIPGSYA
FRAGIGGLAI MKAGAAASPI LIAETLGLIV TVVVVTAALG VGLCLALAAP LPAALGGPSN
QEGVPR
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