| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1538 |
|---|
| Symbol | |
|---|
| ID | 6409195 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1624174 |
|---|
| End bp | 1624872 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642711432 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_001990547 |
|---|
| Protein GI | 192289942 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.307485 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGGCG AGGCTTCCAT TCACGGCGGG ACGTCGATGC TCCTCGATAC TCCGATCGGA
GTATACATGA ATGCCGAGTG CAATCATCGG ATCGCTAACA GTCTGCAAAT GGTTGCGTCG
CTGATTTCGA TGGAGAGCAT GCAGCTTCAC GACGACCGGG CGCGGCGCAG TCTGGAAATG
GCGGGCTTGA GAATACAGGC GATCGCCGGG GTGCATCGCA GGCTCTATTC CACGTCTCTG
GGTGAAGACT CTCTTGATCT GGCCGATTAT CTGATCTCGT TGATCCAGGA GCTTCGTCCG
CTGTGCCTAC CGTCTCTTAA TTCGGGCAGA CTGCTTGCGG ACCTTATCCC GATGACGGTG
CCGCCCGAAA CGGCAACCAG CCTTGGCCTC ATTACGGCAG AGGCGGTCGT CAATGCCTGC
AAATATGCCT ACCGCGATGG GCGATGCGGC GATGTCATCA TTCAGATCCG CCGCAACGGT
CTTGGCAGAG GAACGATGTC GGTCGCCGAT ACCGGGTGTG GACGGTCAGT TGATGATGGA
GCTGCGAGGT CTGGTTTCGG AAGTCGCGTG ATCGATCTCG CGGCGGACCG TATCGGCGCG
ACCATCCGCT ATGAGGACAA TCGTCCGGGG ACGCGGCTGA TCGTCGATTT CCCGGTCAAA
CCTTCCGTGC AGTACGCGGT ATTTTCAGGA TCTGAATAA
|
|---|
| Protein sequence | MIGEASIHGG TSMLLDTPIG VYMNAECNHR IANSLQMVAS LISMESMQLH DDRARRSLEM
AGLRIQAIAG VHRRLYSTSL GEDSLDLADY LISLIQELRP LCLPSLNSGR LLADLIPMTV
PPETATSLGL ITAEAVVNAC KYAYRDGRCG DVIIQIRRNG LGRGTMSVAD TGCGRSVDDG
AARSGFGSRV IDLAADRIGA TIRYEDNRPG TRLIVDFPVK PSVQYAVFSG SE
|
|---|
| |