| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1524 |
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| Symbol | |
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| ID | 6409181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1605203 |
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| End bp | 1606108 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642711418 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_001990533 |
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| Protein GI | 192289928 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.753144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCAGCG CCGAGTTTTA CGGCACACGG CTGGACGAGC ATTGGGGCGG GCAGTGTTCG
GTCACATCAC TGCTGGTGAA GGGAAAGGCG CAAAGCGACG TCACGGTGGC CCGCTTGATC
GGAGGCCCCG GGTTCGGAAT GGTCGCACCG GTGCCGCCCG AAGAGGGCTA CGCGCTGACG
ATCGAATTGA TCGACTATCA GAAGGGTGAG CTCTGGCTCG GCGGCCGAAC CACCCCGCAG
ACCGATCTGC TCAGGAATCA CAGCGTCTTC TTCGACCTTC GCAACGGCGT CGAAGCCAAG
CTGGAGGATC CGTTCGATTT CCTTCATTTC CATATTCCGC GACAGTACTT CTCCGACCTT
GCCGCCGCCA GCGGCGTGAG AGCGATCGAC GAACTCCGCG TGCAGAGCGG CCAGGGCTTC
TTCGACCCGA CGATGCTGCA TCTGGGGATG GCGATGCTTC CCGCGCTCGA GCGCCCCACG
GAGGCCAATC GGCTCTTCCT CGATCACACG ATGCTGGCGC TCTGTGCCCA CATTGCCGGC
ACATACGGCG TCGCAATCGA GCCGCGGGTC CTGGCGAAGG GGCTGTCGGG CTGGCGGCTG
CGGCGAGCCA AGGACCTGAT CGCGAGCCGT CTGGACGGCG ACGTTTCGAT TGCCGAGATC
GCGGCCGAAT GCGGGCTGAC GCCGAGCTAT TTCGCGCGGC AGTTTGCCGA AGCCACCGGG
ACGACACCGC ATCGCTGGCT GCTGAAGATG CGCGTCGAAA CCGCCAAGCG CCTGATCGTC
GAAGGCAGAC TTTCGCTCGC CGAGATCGCG GCAGCTTGCG GCTTCGCCGA CCAGAGTCAT
TTCACACGGG TCTTCGCCCG CGAGACCGGC GCGACGCCGA GGGTGTGGCG CGACCATCTG
CGGTGA
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| Protein sequence | MSSAEFYGTR LDEHWGGQCS VTSLLVKGKA QSDVTVARLI GGPGFGMVAP VPPEEGYALT
IELIDYQKGE LWLGGRTTPQ TDLLRNHSVF FDLRNGVEAK LEDPFDFLHF HIPRQYFSDL
AAASGVRAID ELRVQSGQGF FDPTMLHLGM AMLPALERPT EANRLFLDHT MLALCAHIAG
TYGVAIEPRV LAKGLSGWRL RRAKDLIASR LDGDVSIAEI AAECGLTPSY FARQFAEATG
TTPHRWLLKM RVETAKRLIV EGRLSLAEIA AACGFADQSH FTRVFARETG ATPRVWRDHL
R
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