Gene Rpal_1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1524 
Symbol 
ID6409181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1605203 
End bp1606108 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content65% 
IMG OID642711418 
Producttranscriptional regulator, AraC family 
Protein accessionYP_001990533 
Protein GI192289928 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.753144 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGCG CCGAGTTTTA CGGCACACGG CTGGACGAGC ATTGGGGCGG GCAGTGTTCG 
GTCACATCAC TGCTGGTGAA GGGAAAGGCG CAAAGCGACG TCACGGTGGC CCGCTTGATC
GGAGGCCCCG GGTTCGGAAT GGTCGCACCG GTGCCGCCCG AAGAGGGCTA CGCGCTGACG
ATCGAATTGA TCGACTATCA GAAGGGTGAG CTCTGGCTCG GCGGCCGAAC CACCCCGCAG
ACCGATCTGC TCAGGAATCA CAGCGTCTTC TTCGACCTTC GCAACGGCGT CGAAGCCAAG
CTGGAGGATC CGTTCGATTT CCTTCATTTC CATATTCCGC GACAGTACTT CTCCGACCTT
GCCGCCGCCA GCGGCGTGAG AGCGATCGAC GAACTCCGCG TGCAGAGCGG CCAGGGCTTC
TTCGACCCGA CGATGCTGCA TCTGGGGATG GCGATGCTTC CCGCGCTCGA GCGCCCCACG
GAGGCCAATC GGCTCTTCCT CGATCACACG ATGCTGGCGC TCTGTGCCCA CATTGCCGGC
ACATACGGCG TCGCAATCGA GCCGCGGGTC CTGGCGAAGG GGCTGTCGGG CTGGCGGCTG
CGGCGAGCCA AGGACCTGAT CGCGAGCCGT CTGGACGGCG ACGTTTCGAT TGCCGAGATC
GCGGCCGAAT GCGGGCTGAC GCCGAGCTAT TTCGCGCGGC AGTTTGCCGA AGCCACCGGG
ACGACACCGC ATCGCTGGCT GCTGAAGATG CGCGTCGAAA CCGCCAAGCG CCTGATCGTC
GAAGGCAGAC TTTCGCTCGC CGAGATCGCG GCAGCTTGCG GCTTCGCCGA CCAGAGTCAT
TTCACACGGG TCTTCGCCCG CGAGACCGGC GCGACGCCGA GGGTGTGGCG CGACCATCTG
CGGTGA
 
Protein sequence
MSSAEFYGTR LDEHWGGQCS VTSLLVKGKA QSDVTVARLI GGPGFGMVAP VPPEEGYALT 
IELIDYQKGE LWLGGRTTPQ TDLLRNHSVF FDLRNGVEAK LEDPFDFLHF HIPRQYFSDL
AAASGVRAID ELRVQSGQGF FDPTMLHLGM AMLPALERPT EANRLFLDHT MLALCAHIAG
TYGVAIEPRV LAKGLSGWRL RRAKDLIASR LDGDVSIAEI AAECGLTPSY FARQFAEATG
TTPHRWLLKM RVETAKRLIV EGRLSLAEIA AACGFADQSH FTRVFARETG ATPRVWRDHL
R