| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1496 |
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| Symbol | mnmA |
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| ID | 6409153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1578920 |
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| End bp | 1580125 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642711393 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001990509 |
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| Protein GI | 192289904 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAC CAATGCTCAA CAGTCTGGAT CTCGAAGGCC GGCCGCAGGA CACCCGCGTC
GTGGTCGCGA TGTCCGGCGG CGTGGATTCC TCGGCGACTG CCGCGCTGCT CAAGGCGCAG
GGCTACGACG TCGTCGGCAT CACGCTGCAG CTCTACGATC ATGGCGAGGC GATCCATCGC
AAGGGCGCCT GCTGCGCTGG GCAGGACATT CACGACGCCC GCGCGGTCGC CGAGCGGATC
GGGATTCCGC ATTACGTGCT CGACTATGAA AGCCGGTTTC GCGAGTCGGT GATCGACAGC
TTTGCCGACA GCTACGCCTC CGGCGAGACG CCGGTGCCGT GCATCGAATG CAACCGCTCG
GTCAAATTCC GCGACCTGCT CGCCACTGCG CGCGAGCTCG GCGCCTCGGC GCTGGCGACT
GGTCACTACG TGTCGTCGCG TCGCCTCGAT GACGGATCGC GGGCGCTGGT CTGCGCCGCC
GATCGCGACC GCGACCAGAG CTACTTCCTG TTCGCGACCA CCCGCGAACA GCTTCAATTC
CTGCGCTTCC CGCTCGGCGA TATGACCAAG CCGCAGACCC GCGAGCTGGC GCGGCAGTTC
GGCCTGTCGG TTGCCGACAA GCACGACAGC CAGGACATCT GCTTCGTGCC GACCGGGCGC
TACACCGATG TGGTGGAGCG GCTGAAGCCG AACGCGATGG AGCCGGGCGA CATCGTCGAT
GTCGATGGCC GCGTGCTCGG CCAGCATCCC GGTATCGTGC ATTTCACCGT CGGCCAGCGC
CGCGGACTCG GCATCGCGTC GCGCTCGCCT TTGTACGTGC TGCGGCTCGA TGCGGCGCGG
CGGCAGGTCG TGGTCGGCCC GCGCGAAGCG CTGCTGATGG ATCGCATCGT GCTGCGCGAC
ATCAACTGGA TCGGCGACGG GGCACTCGAC GACGTGATCG GCGACGGCCT GGAGCTGTTC
GTCCGCGTGC GCTCGACGCG GGCGCCGCAG CCGGCCTGGC TGCGCGCCGC GAACGGCGGC
TACGAGGTCG AACTCGTGGT CGGCGAGGAG GGCGTGTCGC CGGGGCAGGC CTGCGTGTTC
TACGACGCGG CCGAGGGCCA GGCCCGCGTG CTCGGCGGCG GCTTCATCAA GAGCGCTGCG
CCGCGCCGGT TCGAAGGCGG GCGCGAGCAA ATCGAGGCGC CGGCGCTGGC CGCCGCGCGC
GGCTAA
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| Protein sequence | MTEPMLNSLD LEGRPQDTRV VVAMSGGVDS SATAALLKAQ GYDVVGITLQ LYDHGEAIHR
KGACCAGQDI HDARAVAERI GIPHYVLDYE SRFRESVIDS FADSYASGET PVPCIECNRS
VKFRDLLATA RELGASALAT GHYVSSRRLD DGSRALVCAA DRDRDQSYFL FATTREQLQF
LRFPLGDMTK PQTRELARQF GLSVADKHDS QDICFVPTGR YTDVVERLKP NAMEPGDIVD
VDGRVLGQHP GIVHFTVGQR RGLGIASRSP LYVLRLDAAR RQVVVGPREA LLMDRIVLRD
INWIGDGALD DVIGDGLELF VRVRSTRAPQ PAWLRAANGG YEVELVVGEE GVSPGQACVF
YDAAEGQARV LGGGFIKSAA PRRFEGGREQ IEAPALAAAR G
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