Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1496 |
Symbol | mnmA |
ID | 6409153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1578920 |
End bp | 1580125 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642711393 |
Product | tRNA-specific 2-thiouridylase MnmA |
Protein accession | YP_001990509 |
Protein GI | 192289904 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGAAC CAATGCTCAA CAGTCTGGAT CTCGAAGGCC GGCCGCAGGA CACCCGCGTC GTGGTCGCGA TGTCCGGCGG CGTGGATTCC TCGGCGACTG CCGCGCTGCT CAAGGCGCAG GGCTACGACG TCGTCGGCAT CACGCTGCAG CTCTACGATC ATGGCGAGGC GATCCATCGC AAGGGCGCCT GCTGCGCTGG GCAGGACATT CACGACGCCC GCGCGGTCGC CGAGCGGATC GGGATTCCGC ATTACGTGCT CGACTATGAA AGCCGGTTTC GCGAGTCGGT GATCGACAGC TTTGCCGACA GCTACGCCTC CGGCGAGACG CCGGTGCCGT GCATCGAATG CAACCGCTCG GTCAAATTCC GCGACCTGCT CGCCACTGCG CGCGAGCTCG GCGCCTCGGC GCTGGCGACT GGTCACTACG TGTCGTCGCG TCGCCTCGAT GACGGATCGC GGGCGCTGGT CTGCGCCGCC GATCGCGACC GCGACCAGAG CTACTTCCTG TTCGCGACCA CCCGCGAACA GCTTCAATTC CTGCGCTTCC CGCTCGGCGA TATGACCAAG CCGCAGACCC GCGAGCTGGC GCGGCAGTTC GGCCTGTCGG TTGCCGACAA GCACGACAGC CAGGACATCT GCTTCGTGCC GACCGGGCGC TACACCGATG TGGTGGAGCG GCTGAAGCCG AACGCGATGG AGCCGGGCGA CATCGTCGAT GTCGATGGCC GCGTGCTCGG CCAGCATCCC GGTATCGTGC ATTTCACCGT CGGCCAGCGC CGCGGACTCG GCATCGCGTC GCGCTCGCCT TTGTACGTGC TGCGGCTCGA TGCGGCGCGG CGGCAGGTCG TGGTCGGCCC GCGCGAAGCG CTGCTGATGG ATCGCATCGT GCTGCGCGAC ATCAACTGGA TCGGCGACGG GGCACTCGAC GACGTGATCG GCGACGGCCT GGAGCTGTTC GTCCGCGTGC GCTCGACGCG GGCGCCGCAG CCGGCCTGGC TGCGCGCCGC GAACGGCGGC TACGAGGTCG AACTCGTGGT CGGCGAGGAG GGCGTGTCGC CGGGGCAGGC CTGCGTGTTC TACGACGCGG CCGAGGGCCA GGCCCGCGTG CTCGGCGGCG GCTTCATCAA GAGCGCTGCG CCGCGCCGGT TCGAAGGCGG GCGCGAGCAA ATCGAGGCGC CGGCGCTGGC CGCCGCGCGC GGCTAA
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Protein sequence | MTEPMLNSLD LEGRPQDTRV VVAMSGGVDS SATAALLKAQ GYDVVGITLQ LYDHGEAIHR KGACCAGQDI HDARAVAERI GIPHYVLDYE SRFRESVIDS FADSYASGET PVPCIECNRS VKFRDLLATA RELGASALAT GHYVSSRRLD DGSRALVCAA DRDRDQSYFL FATTREQLQF LRFPLGDMTK PQTRELARQF GLSVADKHDS QDICFVPTGR YTDVVERLKP NAMEPGDIVD VDGRVLGQHP GIVHFTVGQR RGLGIASRSP LYVLRLDAAR RQVVVGPREA LLMDRIVLRD INWIGDGALD DVIGDGLELF VRVRSTRAPQ PAWLRAANGG YEVELVVGEE GVSPGQACVF YDAAEGQARV LGGGFIKSAA PRRFEGGREQ IEAPALAAAR G
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