Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1493 |
Symbol | |
ID | 6409150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1575446 |
End bp | 1576264 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642711390 |
Product | lytic murein transglycosylase |
Protein accession | YP_001990506 |
Protein GI | 192289901 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGAAGC TGCGCCTTGC TCTCGTCACC TGCGCCCTCG GCGGCGCGCT GCTGTCCACT GCGCCGGCTG AGGCCGCCCG CTGCGGCGGC GACTTCAACA GCTTCATCGC CAGCTTTTCC GCTGACGCAG CCCAGGCCGG AATTTCACAG GGCGTGATCT CGCAGGCGCT CGGCGGCGTC ACCGAGGACC CCGGCGTGCT GGCGTTCGAC CGCCGCCAGC GCGGCACCTT CAACAAGAGC TTTGAGCAAT ATGTTTCGAC GCGGGTCGGC GCCGGCCGCA TCAAGGCCGG CCGCGCGATG CTGATGCGTC ACGCTTCGCT GCTGTCGCGG ATCGAGCGCC AGTTCGGCGT GCCGCCGCAG ATCGTGGTGG CGATCTGGGG CCTGGAGACC GATTACGGCA AGGGCGACAT GGGCAAGCTG CCGGTGTTCC GCGTGCTGGC GACGCTGGCG CATGACTGCC GCCGGACCGA GCTGTTCCAG GGCGAGCTGC TGGCGGCTCT GCAGATCCTG CAGCGCGGCG ACCTGACGCT GCGCGACATG GTCGGCGCCT ATGCTGGCGA GATCGGCCAG ACCCAGTTCC TGCCGTCGTC CTACATCAAG TACGGCGTCG ACTACGACGG CAACGGCCAC GTCGACCTGC GCCACAGCGT GCCGGACGTG CTGGCCTCGA CCGCCAATCT GCTGAAGAGC GCCGGCTGGA AGGCCGGCGG CTCCTACGAG GAAGGCTCGG CGAATTTCGA GGCGATGCGC GAGTGGAATC GCGCGCTGGT GTATCGCAAG ACGATCGCTT ACTTCGCCGA CAAGCTGATC GAGCAGTAA
|
Protein sequence | MLKLRLALVT CALGGALLST APAEAARCGG DFNSFIASFS ADAAQAGISQ GVISQALGGV TEDPGVLAFD RRQRGTFNKS FEQYVSTRVG AGRIKAGRAM LMRHASLLSR IERQFGVPPQ IVVAIWGLET DYGKGDMGKL PVFRVLATLA HDCRRTELFQ GELLAALQIL QRGDLTLRDM VGAYAGEIGQ TQFLPSSYIK YGVDYDGNGH VDLRHSVPDV LASTANLLKS AGWKAGGSYE EGSANFEAMR EWNRALVYRK TIAYFADKLI EQ
|
| |