Gene Rpal_1476 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1476 
Symbol 
ID6409133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1557105 
End bp1557722 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content66% 
IMG OID642711375 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_001990491 
Protein GI192289886 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.779186 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCTCG AAATGTACCT GACCTTCGTC ACCGCCTGCA TCGTGCTCGC TCTGCTGCCG 
GGGCCGGTGG TGACGCTGGT GATCGCCAAC GGCCTGCGTC ACGGCACACG TGCCGCGTTG 
CTCAATATCG CCGGCGCGCA GCTCGGGCTC GGTCTGGTGA TCGCGCTGGT CGCTGCAGGG 
CTGACCACGT TGATGGCGAC GATGGGTTAT TGGTTCGACT GGGTACGGTT TCTCGGCGCG 
GCGTATCTTG TCTGGCTCGG CATCGGCCTG ATCCGCCGGC CGGTCGAAGG TCTGTCGACC 
GATCAGCCGC CGCCTCCGCC GCGCGGTGGC TTCTTCCTGC AGGGCTTCTT TGTCCTGCTG 
GCGAATCCGA AGGTACTGGT GTTCTTCGGC GCGTTCATCC CGCAGTTCGT CGATATGCAG 
CGCGAGACGG TGCCGCAGGT GGCGCTGCTC GGCGTCACCT TCATGGTGAT CGCGGCGATG 
ACAGATGCGA TCTACGCGCT GCTCGCCGGC CGCGCCCGCA CGATGTTCTC GGCCCAGCGC 
ACGCGGCTGC TGTCGCGGAT CTCCGGCGGC TTCATGATCG GCGGCGGCAT CTGGCTGGCG 
CTCAGCCGGG CGAAGTAA
 
Protein sequence
MSLEMYLTFV TACIVLALLP GPVVTLVIAN GLRHGTRAAL LNIAGAQLGL GLVIALVAAG 
LTTLMATMGY WFDWVRFLGA AYLVWLGIGL IRRPVEGLST DQPPPPPRGG FFLQGFFVLL 
ANPKVLVFFG AFIPQFVDMQ RETVPQVALL GVTFMVIAAM TDAIYALLAG RARTMFSAQR 
TRLLSRISGG FMIGGGIWLA LSRAK