Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1469 |
Symbol | |
ID | 6409126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1551233 |
End bp | 1551757 |
Gene Length | 525 bp |
Protein Length | 174 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642711368 |
Product | hypothetical protein |
Protein accession | YP_001990484 |
Protein GI | 192289879 |
COG category | [S] Function unknown |
COG ID | [COG4297] Uncharacterized protein containing double-stranded beta helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTTG CCCGCGACCA GATCAAACCG CTTGAGTTGG TGTTCGACGA CGACGGGCTG ATCCCGAACA CACCGCTGCC GCTGCTGCTG TACAAGCGCG CTATCGATGT TTCGGGCCGT GAGCCGGAGC ATGCGATCGA GGAGCTGTTC GAGCAAAATG GCTGGGGAGA CCGCTGGCGC AACGGCATTT TCGATTACCA CCATTATCAT GCCACCGTGC ATGAGGCGCT CGGCGTCGCA CGCGGCCGGG CAATGGTGCT GTTCGGCGGC GAACAAGGCG AAGCGATCGA ATTGACACCC GGCGACGTCG CCGTGCTGCC CGCAGGCACC GGCCACAAAT GCCTGTTCGC CAGCCACGAT TTCTCGGTAG TCGGCGCCTA TCCGCAGGGG CCGAAGATGC AGGTGACGCG GCCGACGCCC GACAATTATC GGCGCGCGTT ACAGACGATT CCGCAGGTAG CCCTGCCAAT GACCGATCCG GTGTATGGGG CCGATGGACC ACTGCGGAAG CTGTGGCTGA AGTAG
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Protein sequence | MSLARDQIKP LELVFDDDGL IPNTPLPLLL YKRAIDVSGR EPEHAIEELF EQNGWGDRWR NGIFDYHHYH ATVHEALGVA RGRAMVLFGG EQGEAIELTP GDVAVLPAGT GHKCLFASHD FSVVGAYPQG PKMQVTRPTP DNYRRALQTI PQVALPMTDP VYGADGPLRK LWLK
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