Gene Rpal_1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1469 
Symbol 
ID6409126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1551233 
End bp1551757 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content63% 
IMG OID642711368 
Producthypothetical protein 
Protein accessionYP_001990484 
Protein GI192289879 
COG category[S] Function unknown 
COG ID[COG4297] Uncharacterized protein containing double-stranded beta helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCTTG CCCGCGACCA GATCAAACCG CTTGAGTTGG TGTTCGACGA CGACGGGCTG 
ATCCCGAACA CACCGCTGCC GCTGCTGCTG TACAAGCGCG CTATCGATGT TTCGGGCCGT
GAGCCGGAGC ATGCGATCGA GGAGCTGTTC GAGCAAAATG GCTGGGGAGA CCGCTGGCGC
AACGGCATTT TCGATTACCA CCATTATCAT GCCACCGTGC ATGAGGCGCT CGGCGTCGCA
CGCGGCCGGG CAATGGTGCT GTTCGGCGGC GAACAAGGCG AAGCGATCGA ATTGACACCC
GGCGACGTCG CCGTGCTGCC CGCAGGCACC GGCCACAAAT GCCTGTTCGC CAGCCACGAT
TTCTCGGTAG TCGGCGCCTA TCCGCAGGGG CCGAAGATGC AGGTGACGCG GCCGACGCCC
GACAATTATC GGCGCGCGTT ACAGACGATT CCGCAGGTAG CCCTGCCAAT GACCGATCCG
GTGTATGGGG CCGATGGACC ACTGCGGAAG CTGTGGCTGA AGTAG
 
Protein sequence
MSLARDQIKP LELVFDDDGL IPNTPLPLLL YKRAIDVSGR EPEHAIEELF EQNGWGDRWR 
NGIFDYHHYH ATVHEALGVA RGRAMVLFGG EQGEAIELTP GDVAVLPAGT GHKCLFASHD
FSVVGAYPQG PKMQVTRPTP DNYRRALQTI PQVALPMTDP VYGADGPLRK LWLK