| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1465 |
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| Symbol | |
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| ID | 6409122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1547310 |
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| End bp | 1548137 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711364 |
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| Product | transglutaminase domain protein |
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| Protein accession | YP_001990480 |
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| Protein GI | 192289875 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTCC GCGTCGGCTA TGAGATGATC TACGATTTCC CGCAACCGAC GCCGATGATC
GTGGTGCTCG GCACGCATTT CAGTCGAGCC TCCGACATCA TCGTTCCGGA TTTTCTCACT
GTCGATCCGC CAGTGCAGAT CACGCCGTAT CGCGACATGT TCGGCAATTG GTGCAGCCGC
CTGGTGGCAC CTGCGGGCCG AATGCGGCTC GCCGCCGACG GGATCGTGCG CGACAGTGGA
ATCCCGGATC CGGTGGTGCC GACGGCGATT CAACATGCGA TCGAAGATCT GCCGGCCGAC
AGCATCGTCT ATCTGCTCGG CAGCCGCTAT TGCGAGACCG ACCTGCTGTC CGACACCGCA
TGGAAGATGT TCGAGACCAC GACGCCGGGC TGGCCGCGGG TGCAGGCGAT CTGCGATTTC
GTGCACAACC ATATCAAGTT CGATTACCAG CACGCCCGTG CCACTCGCAC CGCGCATGAA
GCGTTCGACG AGGGCCGCGG CGTGTGCCGC GACTACGCCC ATCTGGCGAT CGCGCTGTGT
CGCTGCATGA ACATTCCGGC TCGCTACTGC ACCGGCTATC TGGGCGACGT CGGCACGCCG
AAGCCGTGGG CGGCCGGCGA TTTCGCCGGC TGGTTCGAAG CGTTCATCGG CGGCCATTGG
TACACGTTCG ATCCGCGCAA CAATGTGCCG CGGCTCGGCC GCGTGCTGAT CGCGCAGGGC
CGCGACGCCG CCGACGTGCC GATCACCCAG ACCTTCGGCC CCAACACCCT GGTCAGCTTC
AAAGTGTGGA CCGACGAAAT CGACGAGACC GCGGACCGTT CGCACTGA
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| Protein sequence | MKLRVGYEMI YDFPQPTPMI VVLGTHFSRA SDIIVPDFLT VDPPVQITPY RDMFGNWCSR
LVAPAGRMRL AADGIVRDSG IPDPVVPTAI QHAIEDLPAD SIVYLLGSRY CETDLLSDTA
WKMFETTTPG WPRVQAICDF VHNHIKFDYQ HARATRTAHE AFDEGRGVCR DYAHLAIALC
RCMNIPARYC TGYLGDVGTP KPWAAGDFAG WFEAFIGGHW YTFDPRNNVP RLGRVLIAQG
RDAADVPITQ TFGPNTLVSF KVWTDEIDET ADRSH
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