Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1452 |
Symbol | |
ID | 6409109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1534213 |
End bp | 1536957 |
Gene Length | 2745 bp |
Protein Length | 914 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642711351 |
Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
Protein accession | YP_001990467 |
Protein GI | 192289862 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0474] Cation transport ATPase |
TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC [TIGR01517] plasma-membrane calcium-translocating P-type ATPase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.244915 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGAAC TGCTGCAAGC CGACATCAAA GGCCCGAACG ATCAGGCCTC CGACGAGATG TGGCACGCGA TCGATGCCGA TCGCGTTCTC ACCGGCCTCG CCACCAGCCG AGGCGGCCTC AGCACCGAAG AGGCCAAACG CCGGCTGCAG AGCTACGGCC CCAATGCGCT GCCAGAGCCG CCGCGTCGCT CGGCGATTTT GCGGTTTCTG TCGCAGTTCA ACAACACCCT GATCTACTTC CTGCTCGCGG CCGCGGTCGC AGCCGCATTC CTCGGCCACC AGATCGATGC CGCCGTGATC GTCGCGGTGG TGACGATCAA CGCCATCGTC GGCTACATCC AGGAAGACAA AGCCGAAAAG GCGCTGGCCG CGATCAAGAA GATGATCTCG CCGCGCGCGC ATGCCTGGCG TGACGGCCAC CGCGTCGTGG TGCCGGCTGA AGAACTCGTG CCGGGCGACG TGGTGATGAT CGAAGCCGGC GATCGCGTGC CGGCGGATTT GCGGCTCACC CGCGCCCGCG GCCTGCTGAT CGACGAGGCA ATGCTGACCG GCGAGTCGGT GGCCTCCGAA AAGCACGACC AGCCCGCGGC GGTGGACGCG CCACTCGGCG ACCGGCTGTG CATGGGGTTC TCCGGCACGC TGGTGTCGGC CGGGCAGGGC TTCGGCGTCG TGGTGGCGAC CGGCGCACGC ACCGAGATCG GCCGCATCAG CACGATGATC CAGGGCGTCG AGCAACTGGC GACGCCGCTG CTTGCACAGA TCAACAAGTT TGGTGAGCGC TTCACCTGGG TGGCGATTTC GGCGGCGGCC GCAATCTTCG CCTTCGCCAC GCTGGTGCGC GACTATGCCT GGGCCGATGC GCTGATCGCT GTGGTGGCGC TCGCGGTCGG CGTGGTGCCG GAAGGCCTGC CGGCGGTGAT CACCATCACG CTGGCCATCG GCGTGCAGCG GATGGCCAAG CGCAACGCCA TCATCCGCCG CCTGCCGGCG GTGGAGACCC TCGGCGCCAC CTCGGTGATC TGCTCCGACA AGACCGGCAC GCTGACGCGC AACGAGATGA CCGCGCGCCG CATCGTCACC GCCGATCACA CGATCCTGGT CAGCGGCTCC GGCTACGTGC CGAAGGGTGA CCTCACCGTC GACGGTAACG ATGATCCTGA AGCGGTGTCG TCGGCGATGC AGCTCGTTCG CTCGGCACTG CTGTGCAACG ACGCGCAGCT GCGCCCGGTC GACGGTCACT ACGTGGTCGA CGGCGATCCG ATGGAGGGCG CGCTAGTCGC ACTCGGGATC AAGGCCGGGC TCGATCCCGA CACCGAGCGG GCCGCGTGGA AGCGCTCCGA CGAGATCCCG TTCGACGCGC AGCATCGCTT CATGGCGACC CGCCACGCCA CCGACTCCGG CGCGCAGGTG ATCTTCGTCA AGGGCGCGCC GGAGCGGCTT CTGGCGATGT GCGCAACTCA AGTCGGCCCG GGAGGCGCAT TGCATCCGAT CGATCAAGAA TTCTGGACCG CGCAGATCGC GCGTGCGGCG GCCGAAGGCG AGCGTGTGCT CGGCTTCGCG CTCCGTTCGC CGGCGCGGCC GTCCGACCAA CTCGGATTTG CCGATCTCGA CGAGGGGCTG GCGTTCATGG GGCTGGTCGG CTTCATCGAT CCGCCGCGCG ATGAGGTGAT CCAGGCGATC GCCGAATGCC GCTCCGCCGG CATCGTGGTG AAGATGATCA CCGGTGATCA CGCCGCGACC GCGGAGGCGA TCGCGCGGCA GCTGAACCTG ACCGACCATC CCGACGTCGT CACCGGGGCC GATCTCGACC GCACGCCGGA TTCTGCCTTC GTCGAGCTCG CGCGCCGCAC CGATGTGTTC GCTCGCACCA ACCCGGAGCA TAAGCTGCGC ATCGTGCAGG CGCTGCAGTC CACTGGCGCA GTGGTGGCGA TGACCGGCGA CGGCGTCAAC GACGCGCCAG CGCTGAAGCA GGCCGATGTC GGCATCTCGA TGGGCCACAA GGGCACTGAG ACCGCCAAGG AAGCCTCGCA GGTGGTGCTG CTCGACGACA ACTTCGTCTC GATCGTCGCC GCGGTGCAGG AAGGCCGCAC CGTTTACGAC AACATCCGCA AAGTCATCGC CTGGACGATC CCGACCAACG GCGGCGAGGT GCTCACGGTC ATCGTCGCGA TCCTCTTCGG CTTCACCATG CCGATGACGC CGGTGCAGAT CCTCTGGATC AACCTGATTC TCACCGTCAC GCTCGGCCTC GTGCTGGCGT TCGAGCCGCC GGAGCCTGGC GTGATGAAGC GGCCGCCGCG GCCGGCGCAC GCGCCGCTGC TGTCGCGCTT CTTGGTGTGG CGGATCTTTT TCGTCTCGTT CCTGTTCACC GTCGGTGCGC TGGCAATCTT CTTCTTCGCG CTCGGCAAGG GACTGTCGCT CGACACCGCC CGAACCATGG TGGTGAACGT GCTTGTGGTG TTCGAGATCT TCTACCTGTT CAACGTCCGC TATCTGCACA CCAGCTCGAT CTCGCTGCGC GGCGCGCTCG GCACCATGCC GGTGCTGGCC GCGCTTGTCG TGGTGATCGC CGCACAGCTC GCCTTCACCT ACGCGCCGTT CATGCACAGC CTGTTCGCCA CCACGCCGAT CTCGCTGGTC GACGGCGCCG TGGTGATCGG CGCCGGCGTG GTGCTGATGA TCGTGCTCGA ACTCGAAAAA CTGGTGATGC GCAAAATCGG CGCGCTGCGC AGTCTCGAGC CGTAA
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Protein sequence | MTELLQADIK GPNDQASDEM WHAIDADRVL TGLATSRGGL STEEAKRRLQ SYGPNALPEP PRRSAILRFL SQFNNTLIYF LLAAAVAAAF LGHQIDAAVI VAVVTINAIV GYIQEDKAEK ALAAIKKMIS PRAHAWRDGH RVVVPAEELV PGDVVMIEAG DRVPADLRLT RARGLLIDEA MLTGESVASE KHDQPAAVDA PLGDRLCMGF SGTLVSAGQG FGVVVATGAR TEIGRISTMI QGVEQLATPL LAQINKFGER FTWVAISAAA AIFAFATLVR DYAWADALIA VVALAVGVVP EGLPAVITIT LAIGVQRMAK RNAIIRRLPA VETLGATSVI CSDKTGTLTR NEMTARRIVT ADHTILVSGS GYVPKGDLTV DGNDDPEAVS SAMQLVRSAL LCNDAQLRPV DGHYVVDGDP MEGALVALGI KAGLDPDTER AAWKRSDEIP FDAQHRFMAT RHATDSGAQV IFVKGAPERL LAMCATQVGP GGALHPIDQE FWTAQIARAA AEGERVLGFA LRSPARPSDQ LGFADLDEGL AFMGLVGFID PPRDEVIQAI AECRSAGIVV KMITGDHAAT AEAIARQLNL TDHPDVVTGA DLDRTPDSAF VELARRTDVF ARTNPEHKLR IVQALQSTGA VVAMTGDGVN DAPALKQADV GISMGHKGTE TAKEASQVVL LDDNFVSIVA AVQEGRTVYD NIRKVIAWTI PTNGGEVLTV IVAILFGFTM PMTPVQILWI NLILTVTLGL VLAFEPPEPG VMKRPPRPAH APLLSRFLVW RIFFVSFLFT VGALAIFFFA LGKGLSLDTA RTMVVNVLVV FEIFYLFNVR YLHTSSISLR GALGTMPVLA ALVVVIAAQL AFTYAPFMHS LFATTPISLV DGAVVIGAGV VLMIVLELEK LVMRKIGALR SLEP
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