| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1450 |
|---|
| Symbol | |
|---|
| ID | 6409107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 1532553 |
|---|
| End bp | 1533350 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642711349 |
|---|
| Product | cobalamin 5'-phosphate synthase |
|---|
| Protein accession | YP_001990465 |
|---|
| Protein GI | 192289860 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0368] Cobalamin-5-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00317] cobalamin 5'-phosphate synthase/cobalamin synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.21274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACT CCCCCCAAGT TTCGCGGCCG ACGCCGACGC TGGCGCAATT GCTCGACGCC
GTACGTTTCC TGACCATTCT GCCGGTGCCG AGCGCCGACC GTGCGCCGGA GCCGGACTGG
CTGATGCGGG CGATGACGTT TTTTCCGGTG GTCGGAGTTG GCATCGGCGT GGTGTCGGCG
GCGGCGATGA TCGTCGGCAC CTCGCTGTTC GGGCCAATGC TCGGCGCCCT ACTAGCCGTG
ACCGCCTCGA TCGCGCTGAC GGGCGCGTTC CACGAAGACG GACTCGCCGA CACCTTCGAT
GCGTTCGGCG GCGGCTGGAC GGTCGAGCGC CGGCTCGAGA TCATGAAGGA CAGCCGGATC
GGCACCTATG GCGCGCTCGC ACTCGGCGTC GGCGTCGCGC TGCGAGTTGC GGCGCTGTCG
CTATTGCCGC TGTGGGCGGC ACTGGCCGCG CTGGTCGCCT GCCACGCGGC GTCGCGCGGC
GCCTCGTGTC TGGTCGCACA CCGGATGAAT TACGCCGGCA ACACCGCGGC GATGAAGGCG
AGCTACGCCG ACACTACGCT GCGCAAGGAT GAACTTGTGC TGGGCGGAAT CGCGGTCGCG
CTTGGCGCGC TGCCGCTGCT CCTGGTGTCG CCGATCGCGG TGGTGATCGG ACTTGCGGCA
GGCAGCGTCC TTGCCGCCGC AATGGCCGGC TGGGCCAAGC GGCTGATCGG CGGCTACACC
GGCGACGTGC TCGGCGCCAG CGAGCAACTG TTCGAGATCG GCTTTCTGCT CGGCGTCGCG
GCGGTGGTCG CCGGATAG
|
|---|
| Protein sequence | MTDSPQVSRP TPTLAQLLDA VRFLTILPVP SADRAPEPDW LMRAMTFFPV VGVGIGVVSA
AAMIVGTSLF GPMLGALLAV TASIALTGAF HEDGLADTFD AFGGGWTVER RLEIMKDSRI
GTYGALALGV GVALRVAALS LLPLWAALAA LVACHAASRG ASCLVAHRMN YAGNTAAMKA
SYADTTLRKD ELVLGGIAVA LGALPLLLVS PIAVVIGLAA GSVLAAAMAG WAKRLIGGYT
GDVLGASEQL FEIGFLLGVA AVVAG
|
|---|
| |