Gene Rpal_1448 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1448 
Symbol 
ID6409105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1530627 
End bp1531856 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content63% 
IMG OID642711347 
ProductFormamidase 
Protein accessionYP_001990463 
Protein GI192289858 
COG category[C] Energy production and conversion 
COG ID[COG2421] Predicted acetamidase/formamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.360137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGAGA CATTGATTAA GGTCGATCTC ACGCAGTCCG CTTACGACAA CGAGATGGTC 
CACAACCGTT GGCATCCGGA CATTCCGATG GCCGCGTGGG TCAATCCGGG CGACGACTTC
ATCGTCGAGA CCTATGATTG GACCGGCGGT TTCATCAAGA ACAACGACTC GGCCGATGAC
GTTCGCGACA TCGACCTGTC GATCGTGCAC TTCCTGTCCG GCCCAATCGG CGTCAAGGGC
GCCGAGCCCG GCGACCTCCT GGTCGTCGAC CTACTCGATA TCGGCCCGAA GGCCGAGAGC
ATGTGGGGCT TCAACGGCTT CTTCTCCAAG CAGAACGGCG GCGGCTTCCT CACCGATCAC
TTCCCGCTGG CGCAGAAGTC GATCTGGGAC TTCAAGGGCA TGTACACGTC CTCGCGCCAC
ATCCCGGGCG TGAATTTCGC CGGCCTGATC CATCCCGGCC TGATCGGCTG CTTGCCCGAT
CCGAAGCTGC TGTCGGCGTG GAACGAACGT GAGACCGCGC TGATCGCCAC CAATCCGACC
CGCGTGCCCG GCCTCGCCAA TCCGCCGTTC GCGCCGACCG CCCACATGGG CAAGCTGAAG
GGCGACGACA AGGCCAAGGC TGCGGCCGAA GGCGCCCGCA CCGTGCCGCC GCGTGAGCAC
GGCGGTAACT GCGACATCAA GGATCTGTCG CGCGGTTCGA AGATCTACTT CCCGGTCTAT
GTGCCGGGCG GCGGCCTGTC GATGGGCGAT CTGCACTTCA GCCAGGGCGA CGGCGAGATC
ACCTTCTGCG GCGCGATCGA GATGGCCGGC TGGCTGCACA TCAAGGTCGA CATCATCAAG
GACGGCGTTT CGAAGTACGG CATCAAGAAT CCGATCTTCA AGCCGTCGCC GGTGACGCCG
AACTACAAGG ACTACCTGAT CTTCGAGGGC ATCTCGGTCG ACGAAGCCGG CCAGCAGCAC
TACCTCGACG TCACTGTGGC GTATCGCCAG GCGTGCTTGA ACGCGATCGA GTATCTGAAG
AAGTTCGGTT ACTCCGGTGC CCAGGCCTAT TCGATCCTCG GCACCGCGCC GGTACAGGGC
CATATCTCGG GTGTCGTCGA CGTGCCGAAC GCCTGCGCCA CGCTGTGGTT ACCCACCGAG
ATCTTCGACT TCGACATGAT GCCGACCTCG GCCGGCCCGG TGAAGGCGAT CAAGGGCGAC
GTCCAGATGC CGATCTCGCC GGATAAGTAA
 
Protein sequence
MPETLIKVDL TQSAYDNEMV HNRWHPDIPM AAWVNPGDDF IVETYDWTGG FIKNNDSADD 
VRDIDLSIVH FLSGPIGVKG AEPGDLLVVD LLDIGPKAES MWGFNGFFSK QNGGGFLTDH
FPLAQKSIWD FKGMYTSSRH IPGVNFAGLI HPGLIGCLPD PKLLSAWNER ETALIATNPT
RVPGLANPPF APTAHMGKLK GDDKAKAAAE GARTVPPREH GGNCDIKDLS RGSKIYFPVY
VPGGGLSMGD LHFSQGDGEI TFCGAIEMAG WLHIKVDIIK DGVSKYGIKN PIFKPSPVTP
NYKDYLIFEG ISVDEAGQQH YLDVTVAYRQ ACLNAIEYLK KFGYSGAQAY SILGTAPVQG
HISGVVDVPN ACATLWLPTE IFDFDMMPTS AGPVKAIKGD VQMPISPDK