Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1448 |
Symbol | |
ID | 6409105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1530627 |
End bp | 1531856 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642711347 |
Product | Formamidase |
Protein accession | YP_001990463 |
Protein GI | 192289858 |
COG category | [C] Energy production and conversion |
COG ID | [COG2421] Predicted acetamidase/formamidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.360137 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGAGA CATTGATTAA GGTCGATCTC ACGCAGTCCG CTTACGACAA CGAGATGGTC CACAACCGTT GGCATCCGGA CATTCCGATG GCCGCGTGGG TCAATCCGGG CGACGACTTC ATCGTCGAGA CCTATGATTG GACCGGCGGT TTCATCAAGA ACAACGACTC GGCCGATGAC GTTCGCGACA TCGACCTGTC GATCGTGCAC TTCCTGTCCG GCCCAATCGG CGTCAAGGGC GCCGAGCCCG GCGACCTCCT GGTCGTCGAC CTACTCGATA TCGGCCCGAA GGCCGAGAGC ATGTGGGGCT TCAACGGCTT CTTCTCCAAG CAGAACGGCG GCGGCTTCCT CACCGATCAC TTCCCGCTGG CGCAGAAGTC GATCTGGGAC TTCAAGGGCA TGTACACGTC CTCGCGCCAC ATCCCGGGCG TGAATTTCGC CGGCCTGATC CATCCCGGCC TGATCGGCTG CTTGCCCGAT CCGAAGCTGC TGTCGGCGTG GAACGAACGT GAGACCGCGC TGATCGCCAC CAATCCGACC CGCGTGCCCG GCCTCGCCAA TCCGCCGTTC GCGCCGACCG CCCACATGGG CAAGCTGAAG GGCGACGACA AGGCCAAGGC TGCGGCCGAA GGCGCCCGCA CCGTGCCGCC GCGTGAGCAC GGCGGTAACT GCGACATCAA GGATCTGTCG CGCGGTTCGA AGATCTACTT CCCGGTCTAT GTGCCGGGCG GCGGCCTGTC GATGGGCGAT CTGCACTTCA GCCAGGGCGA CGGCGAGATC ACCTTCTGCG GCGCGATCGA GATGGCCGGC TGGCTGCACA TCAAGGTCGA CATCATCAAG GACGGCGTTT CGAAGTACGG CATCAAGAAT CCGATCTTCA AGCCGTCGCC GGTGACGCCG AACTACAAGG ACTACCTGAT CTTCGAGGGC ATCTCGGTCG ACGAAGCCGG CCAGCAGCAC TACCTCGACG TCACTGTGGC GTATCGCCAG GCGTGCTTGA ACGCGATCGA GTATCTGAAG AAGTTCGGTT ACTCCGGTGC CCAGGCCTAT TCGATCCTCG GCACCGCGCC GGTACAGGGC CATATCTCGG GTGTCGTCGA CGTGCCGAAC GCCTGCGCCA CGCTGTGGTT ACCCACCGAG ATCTTCGACT TCGACATGAT GCCGACCTCG GCCGGCCCGG TGAAGGCGAT CAAGGGCGAC GTCCAGATGC CGATCTCGCC GGATAAGTAA
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Protein sequence | MPETLIKVDL TQSAYDNEMV HNRWHPDIPM AAWVNPGDDF IVETYDWTGG FIKNNDSADD VRDIDLSIVH FLSGPIGVKG AEPGDLLVVD LLDIGPKAES MWGFNGFFSK QNGGGFLTDH FPLAQKSIWD FKGMYTSSRH IPGVNFAGLI HPGLIGCLPD PKLLSAWNER ETALIATNPT RVPGLANPPF APTAHMGKLK GDDKAKAAAE GARTVPPREH GGNCDIKDLS RGSKIYFPVY VPGGGLSMGD LHFSQGDGEI TFCGAIEMAG WLHIKVDIIK DGVSKYGIKN PIFKPSPVTP NYKDYLIFEG ISVDEAGQQH YLDVTVAYRQ ACLNAIEYLK KFGYSGAQAY SILGTAPVQG HISGVVDVPN ACATLWLPTE IFDFDMMPTS AGPVKAIKGD VQMPISPDK
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