| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1445 |
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| Symbol | |
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| ID | 6409102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1527973 |
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| End bp | 1529124 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642711344 |
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| Product | urea ABC transporter, permease protein UrtC |
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| Protein accession | YP_001990460 |
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| Protein GI | 192289855 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR03408] urea ABC transporter, permease protein UrtC |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAGCC CGCGCTTTCT CAGTCGTACC GATCTGCTCG GTCTCGCCGT CCTCGCCTTG
CTCCTGGTGG TGATCCTGCC GCTGTCGCTC GACGTGTTCC GCCTCAATCT CGTGGCCAAA
TATCTGACCT ACGCCTTCGT GGCGATCGGC CTGGTGCTGT GCTGGGGCTT CGGCGGGATT
CTCAGTCTCG GCCAGGGCGT GTTCTTCGGC CTCGGTGGCT ACTGCATGGC GATGTATCTC
AAGCTGGAAG CCTCTAGCGT CGAGAACACC AAGATCCAGT CGACGCCTGG CATTCCGGAC
TTCATGGACT GGAACCAGAT CACCCAGATC CCGTGGTTCT GGCAGCCGTT CCACAGCCTG
ACGATCACCG TGATCGCGAT CCTGGTGGTG CCGGCGGTGT TCGCCTTCCT GATCGGTGCT
GCGATGTTCA AGCGCCGGGT GGGCGGCGTG TATTTCGCCA TCATCACCCA GGCGATCGCC
GCGATCATGA CCATCCTGAT CATCGGCCAG CAGGGCTACA CCGGCGGCAT CAACGGCATC
ACCGACCTGC GTACCTTGAA GGGCTGGGAC ATCCGTCCCG ACCACGCCAA GGTGGTGCTG
TACTTCGTCG AAGTCGCGTT CCTGTTCGGC GCGATCCTGC TGGCACTGTT CGTGCGGCAC
TCGAAGCTCG GCCGCATTCT GGTGGCGATG CGCGAGAAGG AGGACCGGGT GAGGTTCTCC
GGCTACAGCG TCGCCAACTT CAAGATCTTC GCTTTCTGCC TCGCGGCGAT GTTCGCGGCG
GTCGGCGGCG CGATGTTCAC ACTCAACGTC GGTTTCATGT CGCCGTCCTT CGTCGGCATC
GTGCCGTCGA TCGAAATGGT GATCTACACC GCGGTTGGCG GCCGGCTGTC GATCTTCGGC
GCGATCTACG GAACGCTGCT GGTCAACTTC GCCAAGACCT CGCTGTCGGA ATCCTTCCCG
CAGCTCTGGC TGTTCGGTCT CGGCGCCTTG TTCATCGCGG TGGTGCTGAT CTTCCCGAAT
GGTCTCGCCG GCATCTGGCG CGATTACGTC CAGCCGCTGT TCGACAAGCT GATCTCCAAG
CGAAAGCCCG GTTCGGATCC TACAGGTGGC AAGTCGTTCG GCCCGGTGGC CGACGGCGCC
CCGGCGGAAT GA
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| Protein sequence | MESPRFLSRT DLLGLAVLAL LLVVILPLSL DVFRLNLVAK YLTYAFVAIG LVLCWGFGGI
LSLGQGVFFG LGGYCMAMYL KLEASSVENT KIQSTPGIPD FMDWNQITQI PWFWQPFHSL
TITVIAILVV PAVFAFLIGA AMFKRRVGGV YFAIITQAIA AIMTILIIGQ QGYTGGINGI
TDLRTLKGWD IRPDHAKVVL YFVEVAFLFG AILLALFVRH SKLGRILVAM REKEDRVRFS
GYSVANFKIF AFCLAAMFAA VGGAMFTLNV GFMSPSFVGI VPSIEMVIYT AVGGRLSIFG
AIYGTLLVNF AKTSLSESFP QLWLFGLGAL FIAVVLIFPN GLAGIWRDYV QPLFDKLISK
RKPGSDPTGG KSFGPVADGA PAE
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