| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1443 |
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| Symbol | |
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| ID | 6409100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1525603 |
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| End bp | 1526865 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642711342 |
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| Product | urea ABC transporter, urea binding protein |
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| Protein accession | YP_001990458 |
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| Protein GI | 192289853 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | [TIGR03407] urea ABC transporter, urea binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGACG AAAACAAGAC GGGCCTGAAT TCGCCGCTCC GGCGTAAACT GCTGATGGGG
ATGGCGGCAA TTCCCGCCCT CACGATGCTG CCGCGCACGT CGTTCGCGCA GGCGCCTGCA
ACTTCTGCGG TCAATACGAC CGGACTCGCG GTGACGGATA CTGAGGTCAC GGTCGGCATC
CTGCACTCGG TCACCGGCAC CATGGCGATC TCCGAGACCG GTTCGGTGCA GGCCGAGAAG
TTGGCGATCG AACAGATCAA CGCCGCGGGC GGTGTGCTCG GCCGCAAGAT CAAGTACATC
CAGGAAGACG GCGCCTCCGA CTGGCCGACC TTTGCCGAGA AGGCCAAGAA GCTCCTGGTC
AACGACAAAT GCGCCGCGGT GATGGGCTGC TGGACCTCGG CCTCGCGCAA GGCAGTGCTG
CCGGTGTTCG AGCAGTACAA CGGCATGCTG TACTACCCGA CCTTCTACGA AGGCCTCGAG
CAGTCCAAGA ACGTCATCTA CACCGGTCAG GAAGCCACCC AGCAGATCAT CGCCGGCCTC
GATTGGGTCA ACAAGACCAA GGGCGCCAAG AGTTTCTACC TGCTCGGCTC CGACTACATC
TGGCCGCGCA CCTCGAACAA GATCGCCCGC AAGCACATCG AGAACCATCT TCAGGGCTGC
AAGGTGGTCG GCGAAGAATA CTTCCCGCTC GGCCACACCC AGTTCAACTC GGTAATCAAC
AAGATCAAGC TGACCAAGCC GGACGTGATC TACGCGATCA TCGTCGGTGG TTCGAACGTG
GCGTTCTACA AGCAGCTCAA GGCTGCCGGC ATCGACCTGT CGAAGCAGAC CCTGCTGACG
ATCTCGGTGA CCGAGGACGA AATCGACGGC ATCGGCGGTG AGAACATCGC GGGCGCTTAC
GCCTGCATGA AGTACTTCCA GTCGCTCGAC AACCCGAACA ACAAGAAGTT CGTCGAGGAA
TTCCACAAGA TGTGGGGCCC CAAGACGGTG ATCGGAGACG TCACCCAGGC TGCCTATCTC
GGCCCGTGGC TGTGGAAATT GACCGTCGAG AAGGCCGGCT CGTTCGACAT CGACAAGGTC
GCGGCGGCTT CGCCCGGCGT CGAGTTCAAG GGCGCGCCGG AAGGCTACGT CCGGATCCAC
GAGAACCACC ATCTGTGGTC CAAGACTCGC GTCGGACGCG CCAAGGCGGA CGGTCAGTAC
GAGCTGATCT ACGAAACTGC CGATCTGGTC GAGCCCGATC CGTTCCCGAA GGGCTACCAG
TAA
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| Protein sequence | MSDENKTGLN SPLRRKLLMG MAAIPALTML PRTSFAQAPA TSAVNTTGLA VTDTEVTVGI
LHSVTGTMAI SETGSVQAEK LAIEQINAAG GVLGRKIKYI QEDGASDWPT FAEKAKKLLV
NDKCAAVMGC WTSASRKAVL PVFEQYNGML YYPTFYEGLE QSKNVIYTGQ EATQQIIAGL
DWVNKTKGAK SFYLLGSDYI WPRTSNKIAR KHIENHLQGC KVVGEEYFPL GHTQFNSVIN
KIKLTKPDVI YAIIVGGSNV AFYKQLKAAG IDLSKQTLLT ISVTEDEIDG IGGENIAGAY
ACMKYFQSLD NPNNKKFVEE FHKMWGPKTV IGDVTQAAYL GPWLWKLTVE KAGSFDIDKV
AAASPGVEFK GAPEGYVRIH ENHHLWSKTR VGRAKADGQY ELIYETADLV EPDPFPKGYQ
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