| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1440 |
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| Symbol | |
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| ID | 6409097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1520112 |
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| End bp | 1521065 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711339 |
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| Product | ribonuclease BN |
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| Protein accession | YP_001990455 |
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| Protein GI | 192289850 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCTG CGGAGCCGAG CGCTGCGCGC CGCGTATGGC GCGCGCCCGA ACGCACCTCT
CCGGCCGGGC TGTATCGGGT CGCGGATTCG CCATGGCAGG TGCTGTGGGC CGAGTGGAAG
CCGATCGCCG GCGGCACTTA TAGGCGGATC GGCGACGACC GTTTGTTTCT GGTCGCTGCA
GGCGTGGTGT TCTATTGGCT GCTCGCGCTG TTTCCCGCCA TCACAGCTCT GGTGTCGTCC
TATGCCCTGT TTGCTGACGC GGCCACGATC GGTGACCATC TGGCGCAGCT TTCCTCCATC
GTACCGGCTG GTACATACTC GGTGATCGAG GAGCAGGTCG GCCGCGTGTT GGCGAACGGC
GAGGCCAAGC TGGGGCTTGC GTTTCTGATC AGCCTATCGC TGGCACTGTG GAGTGCGAAC
GGCGGGGTCA AGGCGATTAT CGACGCGCTC AACGCGGTGT ACGATGTCGA GGAACAGCGC
GGCTTCTTCA AGCTCAATGG ATTTTCACTG CTGCTCACGC TTGGCGCCCT TGGCGCGGTG
CTGGCGGCGA TCGGTCTGGT GATCGCCGCG CCGATCGTAT TAGCGCGGAT TGGGCTTGGC
AATCTGGTGG CGGTCGCGAT CGACTATGGG CGCTGGCCTG TATTGGCGTT GATGACGTTC
GGCGGTCTGT CGCTGCTATA TCGCATAGCG CCAAACCGGC CGTCGCCACC GTGGCGTTGG
GTGGCGCCCG GTAGCATCGT CGCGGCGCTG AGCTGGCTCG CCGGCTCTGC CGCGTTGTCC
TATTACCTCG CCAATTTCGC CGACTACAAC GCCACCTACG GCTCACTCGG CGCGGCGATC
GGCCTGATGA TCTGGATGTG GATGACGGCG ATCGTCGTGC TTGCCGGCGG CGAGCTCAAT
GCCGAGATCG AAGCAGGCGC GGGCCGGCTC GGGTGCACGG AGACAAACAG TTAG
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| Protein sequence | MNAAEPSAAR RVWRAPERTS PAGLYRVADS PWQVLWAEWK PIAGGTYRRI GDDRLFLVAA
GVVFYWLLAL FPAITALVSS YALFADAATI GDHLAQLSSI VPAGTYSVIE EQVGRVLANG
EAKLGLAFLI SLSLALWSAN GGVKAIIDAL NAVYDVEEQR GFFKLNGFSL LLTLGALGAV
LAAIGLVIAA PIVLARIGLG NLVAVAIDYG RWPVLALMTF GGLSLLYRIA PNRPSPPWRW
VAPGSIVAAL SWLAGSAALS YYLANFADYN ATYGSLGAAI GLMIWMWMTA IVVLAGGELN
AEIEAGAGRL GCTETNS
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