| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1435 |
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| Symbol | |
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| ID | 6409092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1515193 |
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| End bp | 1516704 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642711334 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001990450 |
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| Protein GI | 192289845 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.097494 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGCGC TTCACGACTT CACGCTAGCC GACGTCTATC GCCGCAACGC GGCGCTGTTT
CCCGATCGCA CGGCTTTCGT GGTCGATGGC GTCCGCCTCA CCCACCGCGA CTATCTGGCA
CGGGCCGAGC GGCTGGCCAG CGGCCTGCTC CGCGACAGCG TGCACACCGG CGACCGGGTG
GCGATTCTGT CGCAGAATTG CATCGAGATG ATCGAGCTGA TCGGCGCGGT GGCGTTGATC
GGCGCGATCC TGCTGCCCGT GAACTATCGG CTCAACGCCG ACGAGATCGC CTTCGTGCTC
GGCGACGGCG CCCCCAGCGT GGTGGTGGCC GGCACCGATT ATCGCGACAT CGTTGCCGGG
GTGCTGCCTT CGCTCGGCGG CGTCAAGAAA GCCTACGCGA TCGGCGACGG TAGCGGACCG
TTTGCGCCGT TCAAGGATCT CGCCTCGGAC ACGCCGTTCA GCGCCCCGGA GTTCGGCGCT
GCCGACGGCT TCGTCATCAT CCACACCGCC GCGGTCGGCG GCCGGCCGCG CGGCGCGCTG
ATCTCGCAGG GCAATCTCTT GATCGCGCAA AGCTCGCTGG TCGACGCATG GCGACTGACC
GAAGCCGACG TCAATCTCGG CATGCTACCG CTGTTTCACG TCACCGGGCT CGGCCTGATG
CTGACCCTGC AACAGGCCGG CGGTGCGAGT GTGATCGCCG CGAAGTTCGA CCCAGCGCAG
GCCGCACGCG ACATCGAAGC TCACAAGGTG ACGGTGATGG CCGAGTTCGC GCCGATGCTC
GGCAACATTC TCGATCAGGC CGAGCCGGCG CAGCTGGCCA GCCTGCGCGC CGTGACCGGG
CTCGACACGC CGGAGACGAT CGAGCGGTTC GAGGCCACCT GCCCCAATGC GACGTTCTGG
GCAACGTTCG GCCAATCAGA AACCTCGGGG CTCTCAACTT TTGCGCCCTA TCGTGACCGG
CCGAAATCCG CCGGGCGCCC CCTGTTCTGG CGCACCGTCG CGGTGGTCGA TGCCGAAGAT
CGCCCGCTGC CGCCGGGCGA AGTCGGCGAG ATCGTGCTGC GCGGCCCGAC CGTATTCAAA
GGCTACTGGA ACAATGCGGC CGCCACCCAG CATGCGTTCC GCAATGGTTG GCACCATACC
GGGGACATGG GCCGATTCGA TGCCGACGGC TATTTGTTCT ACGCCGGCCG CGCGCCCGAA
AAGGAGCTGA TCAAGACCGG CGGCGAGAAC GTCTATCCGG CCGAGGTCGA AGGCGCACTG
AAGCAGCATC CAGCGATCGC CGACGCGGTG GTGATCGGCG TGCCAGATCC GCAATGGAGC
GAAGCGATCA AGGCGGTGTG CGTATGCAAA CCAGGCGAAA GCATCGCCGC CGACGCCCTC
GCCGAATTCG TCGCATCGCT GATCGCGCGC TACAAGAAGC CAAAGCACGT GGTGTTCGTC
GAGGAGCTGC CGAAGGATGC GAAGGGTGCT ATCGATCGGG CCGCAGTGAA GACAGCGCAC
GGGCAGGCCT GA
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| Protein sequence | MMALHDFTLA DVYRRNAALF PDRTAFVVDG VRLTHRDYLA RAERLASGLL RDSVHTGDRV
AILSQNCIEM IELIGAVALI GAILLPVNYR LNADEIAFVL GDGAPSVVVA GTDYRDIVAG
VLPSLGGVKK AYAIGDGSGP FAPFKDLASD TPFSAPEFGA ADGFVIIHTA AVGGRPRGAL
ISQGNLLIAQ SSLVDAWRLT EADVNLGMLP LFHVTGLGLM LTLQQAGGAS VIAAKFDPAQ
AARDIEAHKV TVMAEFAPML GNILDQAEPA QLASLRAVTG LDTPETIERF EATCPNATFW
ATFGQSETSG LSTFAPYRDR PKSAGRPLFW RTVAVVDAED RPLPPGEVGE IVLRGPTVFK
GYWNNAAATQ HAFRNGWHHT GDMGRFDADG YLFYAGRAPE KELIKTGGEN VYPAEVEGAL
KQHPAIADAV VIGVPDPQWS EAIKAVCVCK PGESIAADAL AEFVASLIAR YKKPKHVVFV
EELPKDAKGA IDRAAVKTAH GQA
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