| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1434 |
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| Symbol | |
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| ID | 6409091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1514301 |
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| End bp | 1515173 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642711333 |
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| Product | TonB family protein |
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| Protein accession | YP_001990449 |
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| Protein GI | 192289844 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.214443 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGACT ACGTGCTGCA CGAGATGCCC GGGCGCGGCC GCAGCCAATG GCTGCTGTCG
GCGGCCGCGA TCGTCGTGGC ACATTTCGGC CTGATCGCTG CCGCGGTCGC CTGGTATCAA
CAGGCCCCGT CGCCCGGCGT GGTGATGCCG GCGATCCTGG TCGACATGGC GCCGGCCTCC
GCGGCGCCCG CACTGCAACC GCAGGATCTC GCGCCGGGAC CTGAGATGCA GGAAGCGCCC
AAGCCACAGG ATGAGGCGAA ACAGCCGCCG CCGTCACCGG CTCTTGAACC TCCGCAGCAA
CTCGCGGCAC AGCCGCCAGA GCCCCTCGCG CCAGTGGTGC CGGAATCGGA AGTCGTACTG
CCGCAACCGC CCGCTGCGGT CGAACCTTTG CGGCGTGACG ACGCCAAGCC GAAGCGGGAG
GAGATCAGGC GCGAGCGGGC GAAGCGCGAT GATATCAAGC GGGACGAGGC CAAGGCCAAG
CCGCATGCGC ACCCGCCGGC GCCGCGCACC ACGGCGGCGC CGAAGGCCGA GCGCCAGGCT
GCGCTCGCCG CCGCGCCGAG CGCGGGGCAG GCTGCTGCAA CCGCTGCGTT GCCTTCGTAT
CGCGACCGGC TGGCCGCGCA TCTTGCCCGC TACAAGCAAT ATCCGTCGGA GTCGCGGGCG
GCGCGCGAGC AGGGCACGGC GATGCTGTCG TTCACCGTCG GCCGCGGCGG CCAAGTGCTC
GGCAGCCGGC TCGCCCGCAC TTCCGGTTAT TCGGCGCTCG ATGCCGAAAC CATGGCGATG
ATCCGCCGCG CCCAGCCACT GCCGCCGTTC CCGAGCGAGA TCACCCAATC GTCGCTCAGC
TTCACCGTGC CGGTGCGGTT TTCGCTGCAG TGA
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| Protein sequence | MNDYVLHEMP GRGRSQWLLS AAAIVVAHFG LIAAAVAWYQ QAPSPGVVMP AILVDMAPAS
AAPALQPQDL APGPEMQEAP KPQDEAKQPP PSPALEPPQQ LAAQPPEPLA PVVPESEVVL
PQPPAAVEPL RRDDAKPKRE EIRRERAKRD DIKRDEAKAK PHAHPPAPRT TAAPKAERQA
ALAAAPSAGQ AAATAALPSY RDRLAAHLAR YKQYPSESRA AREQGTAMLS FTVGRGGQVL
GSRLARTSGY SALDAETMAM IRRAQPLPPF PSEITQSSLS FTVPVRFSLQ
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