| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1433 |
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| Symbol | |
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| ID | 6409090 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1513867 |
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| End bp | 1514304 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642711332 |
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| Product | TonB system transport protein ExbD |
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| Protein accession | YP_001990448 |
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| Protein GI | 192289843 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.584969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGGCGTGC GGCTCGGCGG ACGACGGCCT GCGGCGGAGG GCGATCTCGA GGTCGCGCAT
GAGATCAACG TCACGCCGTT TATCGACGTG ATGCTGGTGC TGCTGATCAT CTTCATGGTG
GCGGCGCCGC TCGCCACCGT CGATATCGGC GTCGATCTGC CGGCCTCGAC GGCTGCGCCG
CAGGCGCGCC CGGACAAGCC GGTGTATCTG TCGGTGCAGC CGGATCTGAC GCTCGCGGTC
GGCGAGACCA TCGTGGGGCG TGATGCGCTG GGTGCTGCGC TGCAGAGCGC GACGAATGGC
AACAAGGACG AACGGATATT CGTGCGCGCC GACAAGGCGG TGGCTTATGG CGAGTTGATG
GCGGTGATGA ACCTGCTGCG CGGCGCCGGC TATCTCAAGG TCGCGCTGGT TGGACTCGAC
GGCCGGGATC AGCCATGA
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| Protein sequence | MGVRLGGRRP AAEGDLEVAH EINVTPFIDV MLVLLIIFMV AAPLATVDIG VDLPASTAAP
QARPDKPVYL SVQPDLTLAV GETIVGRDAL GAALQSATNG NKDERIFVRA DKAVAYGELM
AVMNLLRGAG YLKVALVGLD GRDQP
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