| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1428 |
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| Symbol | |
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| ID | 6409085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1508145 |
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| End bp | 1509350 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642711327 |
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| Product | Extracellular ligand-binding receptor |
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| Protein accession | YP_001990443 |
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| Protein GI | 192289838 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCCA GCACTCTGCC GATGCTCGCC GCCGCGGCGC TGATCGGCCT CGGCGCCCAG
CCCGCCCTCG CGCAGTTCAA GACCCAGGGT GTCACCGACA GCGAGATCGT GATTGGCACC
CACATGGATC TCAGCGGGCC GCTGAAGGCC TGGGGCGTGC CGGCCACCAA CGGCATGAAG
CTGGCGATCG CGCAGATCAA TGACGCCGGC GGCATCAACG GCCGCAAGAT CCGCCTCGTC
AACGAGGACG ACGGCTACGA TCCGAAGAAG GCAGTGCTGA TCACCCAGAA GCTGATCGAG
CTCGACAAGG TGTTCGCGAT CGTATCGGCA ATGGGCTCCG CCACCACGCT GGCGCCGATG
CCGCTGGTGC AGTCGGCGGG CCTGCTGCAC CTGTTTCCGA TCACCGCCGC TGAATTCACC
TTCAAGATGG ACCCGGTCAA GCCTGAAGAC CGGCTGAAGT TCAACATGTT CAGCCCGTAT
TACGACACGA TGCGGCTCGG CATCAAATAC GTGATCGAGA ACACCAAACC GAAGAAGCCC
TGCATCGTCT ATCAGGACGA CGAGATGGGT AAGAATTTCA CCGACGCCTA CACCGACCAG
CTCAAGGCAA TGAACATCCC GAGCGCCACC ATGGTGTCGT TCAAGCGCGG CGCCACCGAT
TTCAACTCCC AGGTTGCGCG GATGAAGGCG GACGGCTGTG ACATGGTGGC GCTCGGCTCG
GTGGTGCGCG AGTCGGTCGG AATCACCACG GCGGCGCAGA AGCTCGGCTG GAAGCCGACC
TTCGTGGTGT CATCGCCGAG CTACGTGCCG GATTTTCCGC AGCTCGGCAA GGAAACCACC
GAGGGCATCT ATGGCGTCGG CCAGACCGAG ATCTTCTATG CCGACACCGC CACCGGCGAG
GTCAAGAAGT TCATCGAAGA CTACAAAAAG ATGTTCGGCA TCGATGCCAA CCAGCAGTCG
ACCGCCGGCT ACAACGGCGT GATGGTGTTC GCGCATTTCG CCAAGAAGGC CGGCAAGGCC
CTCACCACCG ACTCGCTGAT GACCGCGCTG GAATCCGGCG AGACCTTCGA CGACATCTTC
GGTGGCGCCC CGATCAGTTT CTCCAAGGAC AACCACCTTG GCGTCTCGGC CGCCGTGATC
GGCCAGATCA AGGACGGCCG CTGGACGACG ATCGCCAAGA ACCAGTCCTA CAAGACCGAT
AAATAA
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| Protein sequence | MKSSTLPMLA AAALIGLGAQ PALAQFKTQG VTDSEIVIGT HMDLSGPLKA WGVPATNGMK
LAIAQINDAG GINGRKIRLV NEDDGYDPKK AVLITQKLIE LDKVFAIVSA MGSATTLAPM
PLVQSAGLLH LFPITAAEFT FKMDPVKPED RLKFNMFSPY YDTMRLGIKY VIENTKPKKP
CIVYQDDEMG KNFTDAYTDQ LKAMNIPSAT MVSFKRGATD FNSQVARMKA DGCDMVALGS
VVRESVGITT AAQKLGWKPT FVVSSPSYVP DFPQLGKETT EGIYGVGQTE IFYADTATGE
VKKFIEDYKK MFGIDANQQS TAGYNGVMVF AHFAKKAGKA LTTDSLMTAL ESGETFDDIF
GGAPISFSKD NHLGVSAAVI GQIKDGRWTT IAKNQSYKTD K
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