| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1424 |
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| Symbol | |
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| ID | 6409081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1503765 |
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| End bp | 1504910 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642711323 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001990439 |
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| Protein GI | 192289834 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.132982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCGC ACGTCCGAAC CAGCTACGCG CAGAGCGAGC AGCTGTTCCC GTCGAAGAAC
GCCGCGTTCT GGTACGCCGT CTTGGTCGCG GCGCTGATCG CCGCGCCTTA TGTGCTGGAA
TCCTATTATC TCAGCCAGCT CGTGTTCGTG CTGATCTACG CCATCGTCGG CATCGCCATG
AACGTGCTGT CGGGCCAGGC TGGGCAGGTG TCGATCGGCC ATGCCGCGTT CATGGCGATC
GGCGCCTACT CCGCCGCGGT GGCCGAGAAA TACGGCCTGC CGCTGCCGGT CTATCTGGTG
CTGGCCGGCG GTTTCACTGG GCTGATCGGC TATCTGGTCG GACTTCCGGC CTTACGGCTT
CACGGGATCT ATCTGGCGAT CGCCACACTG GCGTTCGCGT TCATCGTCGA AGAGATCGTC
ACCCGCTGGG AGAGCGTCAC CAACGGCAAC GAAGGCCTGA TGCTCGGTGC GCCCTCGCTC
TTCGGGCTCA AGCTCGGCGC GCAGGGCTTC TATTATCTCT GCCTCGGCGT CACCGTGGTG
GTAATCCTCG CCGCCATCAA TATCCTGCGC TCGCCGACCG GCCGCGCCTT CCTGGCGATC
CGCGACAGCG AAACCGCGGC GCGAAGCATG GGCATCGACA CCGCGCGGTA CAAGACACGC
GCGTTCGCGA TCTCCGCCGC ATTCACCGGC CTTGCCGGCG TGCTGTACGC GCACAAGCTG
TCGTTCATCA GCCCGGAAAT GTTCAGCCTG TCGATGTCGA TCGAATTCGT CATGATCATC
ATCATCGGCG GCGTGCTCAG CCTGCGCGGC GCGGTGTTCG GCGCGATCTT CATGATCATG
GTCGATCCGA TCCTGATCGT GGTGAAGGAC AAGGTTCCGC AACTGACGCT GGCGGCGATG
CAGGGCATCG GCCTGTCGGA TCAGCTCACC GACGCGATCC AGGCCGGCGT GGTCCGCGTC
GCCGGCGCGC CGGGGCTGAA GTCACTTATC TTCGGCCTGA TCATCATCCT GTTCATCATC
TTCGAGCCGA TGGGCCTCGA CGGTCGCTGG GCCCGAGTGA AGTCGTATTT CCGACAGTTC
CCGCTGTATC GGCCGACCAG CTCCCGCGCG CAAAGGATGT TCCTGAAGTC GGAGCGCAAC
CGGTGA
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| Protein sequence | MSAHVRTSYA QSEQLFPSKN AAFWYAVLVA ALIAAPYVLE SYYLSQLVFV LIYAIVGIAM
NVLSGQAGQV SIGHAAFMAI GAYSAAVAEK YGLPLPVYLV LAGGFTGLIG YLVGLPALRL
HGIYLAIATL AFAFIVEEIV TRWESVTNGN EGLMLGAPSL FGLKLGAQGF YYLCLGVTVV
VILAAINILR SPTGRAFLAI RDSETAARSM GIDTARYKTR AFAISAAFTG LAGVLYAHKL
SFISPEMFSL SMSIEFVMII IIGGVLSLRG AVFGAIFMIM VDPILIVVKD KVPQLTLAAM
QGIGLSDQLT DAIQAGVVRV AGAPGLKSLI FGLIIILFII FEPMGLDGRW ARVKSYFRQF
PLYRPTSSRA QRMFLKSERN R
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