Gene Rpal_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1421 
Symbol 
ID6409078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1500762 
End bp1501322 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content67% 
IMG OID642711320 
Productpyruvate ferredoxin/flavodoxin oxidoreductase 
Protein accessionYP_001990436 
Protein GI192289831 
COG category[C] Energy production and conversion 
COG ID[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.339025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACAT CCCGCATCGA ACTGCGCTTC GGCGGTACCG GCGGCCAGGG CCTGTTGCTC 
AGCGCCAAGC TGCTGGCCGA CGCGCTGGCG CTGGAAGGCC GTCACGTCGC GCAGTCGCAG 
ACCTACGAGC CGACCTCGCG CGGCGGTTTC TGTAACGCCG ACCTCGTCGT CGCTCATGGT 
GAGGTCGACT ATCCGCTGCC GATTGAGTTC GACCATCTGG TGCTGCTCGA CAAAATCGCC 
ATCAAGCCGT CCTGGCCGAA GCTTAAGGCC GGCGCGCTGG TGATCTCCGA CGTCCGGCTG 
TGCCCGGAAC TGCCGGAAGG CGGACGGTTC AAGCGCTATC CGTTGCCGCT TAGCCGCACC 
GCGATCGAAC TCGGCAGCGA ACGCGTCACC AACATCGTCG CGCTCGGCGT GCTGATCGAG 
CTGTCCGGCA TCTGCAAGCA CAAGTCGGTC GAGCAGGTGG TGCGTGCGTC GTCGCCGCGC 
GGCTTCCTTG ACCTCAACAT GGATGCGCTG GCCGCCGGCT ACGCGCTGGC CAAGACGCCT 
GCCGTCGCGG CGGCCTCCTG A
 
Protein sequence
MSTSRIELRF GGTGGQGLLL SAKLLADALA LEGRHVAQSQ TYEPTSRGGF CNADLVVAHG 
EVDYPLPIEF DHLVLLDKIA IKPSWPKLKA GALVISDVRL CPELPEGGRF KRYPLPLSRT 
AIELGSERVT NIVALGVLIE LSGICKHKSV EQVVRASSPR GFLDLNMDAL AAGYALAKTP 
AVAAAS